Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC067852.7-201ENST00000623270 535 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AC018555.1-201ENST00000567548 1980 ntBASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A1Q8WWI5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 RAD17P1-201ENST00000418130 2042 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 A2MP1-204ENST00000566278 4130 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 SNORD116.1-201ENST00000365628 92 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 RNU6-1151P-201ENST00000384684 107 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 TMSB4XP8-201ENST00000402089 135 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 TMSB4XP6-201ENST00000415187 135 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC010099.3-201ENST00000423896 409 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 TMSB4XP1-201ENST00000424567 135 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 NIPA2P1-201ENST00000426223 976 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 MTCO1P54-201ENST00000430139 712 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 HIGD1AP4-201ENST00000430194 280 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC068287.1-201ENST00000430283 295 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 HMGB1P16-201ENST00000447155 540 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC079776.3-201ENST00000450665 370 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 RPL21P126-201ENST00000470049 478 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC011979.1-201ENST00000472300 483 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 RN7SL860P-201ENST00000473738 223 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 MTND2P14-201ENST00000482139 351 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC084024.2-201ENST00000503480 791 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 RN7SKP92-201ENST00000517266 244 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 OR4C2P-201ENST00000530855 1064 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC004217.3-201ENST00000551552 878 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AL442163.2-201ENST00000553912 710 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AADACP1-206ENST00000561502 1193 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC025946.2-201ENST00000603398 234 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC004908.3-201ENST00000610248 625 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC012409.3-201ENST00000611343 981 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 AC123768.4-201ENST00000616244 701 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 uc_338.13-201ENST00000618243 179 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 MIR7641-1-201ENST00000627518 61 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 IQCB2P-201ENST00000401788 1633 ntBASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SLC44A1Q8WWI5 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 MIR3074-201ENST00000384885 81 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 RPL31P52-201ENST00000407532 367 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AL590084.1-201ENST00000407885 387 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 PAICSP7-201ENST00000419829 962 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC007435.1-201ENST00000421086 415 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AL157831.1-201ENST00000426134 473 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 DNAJC19P7-201ENST00000428811 344 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 VDAC1P6-201ENST00000430062 855 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 RPL7P34-201ENST00000433316 712 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 RPL23AP52-201ENST00000439311 478 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AL512326.1-201ENST00000443050 721 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 RPL21P71-201ENST00000465598 459 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 VPS26AP1-201ENST00000483197 979 ntBASIC4.23□□□□□ -1.73
SLC44A1Q8WWI5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms