Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP000843.1-201ENST00000624880 701 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 AC000374.1-201ENST00000434698 1745 ntBASIC4.63□□□□□ -1.67
HMGB4Q8WW32 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGB4Q8WW32 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RNU1-85P-201ENST00000364127 164 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RNU6-657P-201ENST00000383904 107 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 SNORA57.1-201ENST00000391227 145 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 TPT1P2-201ENST00000413105 503 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RPS3AP9-201ENST00000417027 792 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC090960.1-201ENST00000421072 306 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RGS17P1-201ENST00000423358 553 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL022400.1-201ENST00000423946 935 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RPL30P3-201ENST00000424262 333 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RPS29P17-201ENST00000430795 166 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC239367.2-201ENST00000447309 705 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RPS4XP12-201ENST00000461747 709 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RPL7AP28-201ENST00000464513 571 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC007537.2-201ENST00000472093 511 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 RN7SL810P-201ENST00000493031 276 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 SNORD116-26-201ENST00000516006 96 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC084824.1-201ENST00000550917 1005 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL390334.1-201ENST00000556395 450 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC084757.1-201ENST00000559987 490 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC072039.2-201ENST00000608883 439 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL136981.2-201ENST00000617319 734 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL607023.1-201ENST00000620045 248 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AP000648.2-201ENST00000624182 404 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AL390862.1-201ENST00000635467 1469 ntBASIC4.62□□□□□ -1.67
HMGB4Q8WW32 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB4Q8WW32 AC009951.1-201ENST00000623674 2614 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 SNORA70C-201ENST00000384538 135 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 MIR649-201ENST00000384843 97 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RNU2-28P-201ENST00000410457 189 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 TMSB10P2-201ENST00000416049 131 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 E2F6P2-201ENST00000420708 748 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 KCTD10P1-201ENST00000434203 625 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AL591503.2-201ENST00000442314 1005 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 MTCO1P48-201ENST00000448024 1096 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RPL18AP17-201ENST00000455326 198 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC117522.2-201ENST00000510049 657 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RNU6-232P-201ENST00000517144 64 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 RPL23AP53-201ENST00000521854 457 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC087477.6-201ENST00000559595 843 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AL512347.1-201ENST00000566420 503 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 MTCYBP28-201ENST00000566728 1132 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.61□□□□□ -1.67
HMGB4Q8WW32 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGB4Q8WW32 Z94722.1-201ENST00000604328 474 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms