Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 PCNPP1-201ENST00000552501 511 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 TRAV15-201ENST00000556680 249 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC023043.3-201ENST00000593113 385 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC073091.2-201ENST00000603205 907 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC083964.1-201ENST00000607549 630 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC004477.3-201ENST00000614061 590 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC002044.3-201ENST00000623314 541 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 MIR6733-201ENST00000635723 61 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 AC138915.1-201ENST00000565427 1685 ntBASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSBQ8NFR3 ZNF807-201ENST00000328088 1707 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RN7SKP149-201ENST00000363008 344 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RN7SKP171-201ENST00000364417 303 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RNU6-1251P-201ENST00000364502 107 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RNU6-629P-201ENST00000384061 103 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 MTND4P13-201ENST00000402078 1023 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 FO393413.1-201ENST00000402892 195 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AL356057.2-201ENST00000403318 432 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC092638.1-201ENST00000411966 1275 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 HSPE1P12-201ENST00000412576 301 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 YPEL5P1-201ENST00000419731 367 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC006960.1-201ENST00000419980 153 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AL356387.2-201ENST00000422272 243 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 NIPA2P1-201ENST00000426223 976 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 TRGV7-201ENST00000427089 353 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 CYCSP4-201ENST00000429682 331 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 PTP4A1P3-201ENST00000433661 420 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RN7SL601P-201ENST00000471221 293 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RPS3AP6-201ENST00000484430 795 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RN7SL170P-201ENST00000487098 295 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 CDH12P2-201ENST00000504393 298 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 HIGD1AP3-201ENST00000515857 278 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RNU6-319P-201ENST00000516025 108 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 IGKV2D-10-201ENST00000520194 281 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC005000.1-201ENST00000536192 288 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC138761.3-201ENST00000579993 334 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 MTCO2P22-201ENST00000603246 681 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC004808.2-201ENST00000627965 773 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC093831.2-201ENST00000624393 3427 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.88□□□□□ -2.11
SPTSSBQ8NFR3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 RNU6-799P-201ENST00000363567 107 ntBASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 RNU1-130P-201ENST00000363930 160 ntBASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 SNORD56.5-201ENST00000364281 72 ntBASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC1.87□□□□□ -2.11
SPTSSBQ8NFR3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms