Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AL512646.1-201ENST00000269395 1077 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AL049610.1-201ENST00000423374 372 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 CHIAP3-201ENST00000423668 1133 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 OR5AW1P-201ENST00000426334 1006 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 HIGD1AP4-201ENST00000430194 280 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 RPL36P19-201ENST00000430744 301 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AL358472.1-201ENST00000431295 329 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC009963.2-201ENST00000453431 138 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC098824.1-201ENST00000453565 980 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 RPL38P1-201ENST00000460914 211 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SL738P-201ENST00000470264 297 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 RPS27P23-201ENST00000487608 251 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC008885.2-201ENST00000509506 930 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 KRT19P6-201ENST00000510983 209 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC005351.1-201ENST00000511152 786 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-416P-201ENST00000516265 103 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AF279873.1-201ENST00000523393 313 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 SERPINE4P-201ENST00000554978 281 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC122134.1-202ENST00000569111 1201 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AF129408.1-201ENST00000608767 431 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AL359535.1-201ENST00000612100 1087 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AC006927.2-201ENST00000639256 389 ntBASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71LQ8N9Z2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC073055.1-201ENST00000456901 1621 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 DNAJC19P6-201ENST00000401853 280 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 HSPE1P8-201ENST00000406997 288 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 RNU2-21P-201ENST00000410368 188 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-77P-201ENST00000410554 91 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 RPS15AP40-201ENST00000419621 391 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 PAICSP7-201ENST00000419829 962 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC241520.1-201ENST00000422654 1099 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 OR4F13P-201ENST00000428478 931 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 RPL21P110-201ENST00000433345 446 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC011242.1-201ENST00000433596 1158 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC044797.1-201ENST00000445744 679 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 BX248409.1-201ENST00000455497 255 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 FCF1P6-201ENST00000456841 595 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 MTND2P28-201ENST00000457540 1044 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC083982.1-201ENST00000485679 344 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 RPS23P1-201ENST00000491662 432 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SL691P-201ENST00000494487 301 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC093801.2-201ENST00000503966 1050 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 OR5M14P-201ENST00000506803 618 ntBASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC71LQ8N9Z2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms