Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SYNE4Q8N205 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SYNE4Q8N205 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SYNE4Q8N205 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SYNE4Q8N205 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.43□□□□□ -1.54
SYNE4Q8N205 AC012020.1-201ENST00000624541 1728 ntBASIC5.43□□□□□ -1.54
SYNE4Q8N205 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SYNE4Q8N205 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SYNE4Q8N205 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 RNA5SP130-201ENST00000364431 114 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 RNA5SP513-201ENST00000364648 118 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 MTND4LP20-201ENST00000402379 270 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 RN7SKP159-201ENST00000410657 292 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 RN7SKP167-201ENST00000411047 285 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 USP9YP33-201ENST00000412220 421 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC006960.1-201ENST00000419980 153 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 RPL7P2-201ENST00000427639 268 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 CDY14P-201ENST00000431260 1014 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL356276.2-201ENST00000435919 558 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 YWHAZP7-201ENST00000436906 631 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL162151.2-201ENST00000448875 158 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 CDY23P-201ENST00000451661 1014 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 RPL7P22-201ENST00000466005 733 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 CCDC75P1-201ENST00000469247 791 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 RPL23AP37-201ENST00000479658 549 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL024509.2-201ENST00000493462 493 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC092045.1-201ENST00000495716 1231 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 RPS27AP13-201ENST00000498403 237 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 SUMO2P4-201ENST00000504193 276 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC112198.1-201ENST00000505369 1220 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 MTCO3P15-201ENST00000526563 574 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 CCNG2P1-201ENST00000549521 1000 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 HIGD1AP17-201ENST00000554576 276 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL512347.1-201ENST00000566420 503 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL357078.3-201ENST00000607528 618 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC004223.4-201ENST00000612426 332 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL021997.2-201ENST00000615674 271 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL356274.1-201ENST00000617064 410 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC024023.1-201ENST00000624530 922 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC068137.3-201ENST00000639191 341 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC073869.6-201ENST00000640656 341 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 ZNF833P-201ENST00000424938 1494 ntBASIC5.42□□□□□ -1.54
SYNE4Q8N205 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SYNE4Q8N205 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SYNE4Q8N205 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SYNE4Q8N205 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SYNE4Q8N205 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 NACA3P-201ENST00000359690 648 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 RNU1-14P-201ENST00000362759 152 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 RNA5SP27-201ENST00000363839 119 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 ZNF603P-201ENST00000405613 487 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 TAF13P2-201ENST00000416876 286 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 Z75741.2-201ENST00000417272 1167 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 MTCO2P34-201ENST00000421994 607 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 BTF3P10-201ENST00000433415 495 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 RPL5P32-201ENST00000454085 879 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 RNU7-140P-201ENST00000459546 60 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC079804.1-201ENST00000461922 436 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC069528.1-202ENST00000482888 637 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 RNU6-1004P-201ENST00000516584 111 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 OR5AK3P-201ENST00000527486 1297 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms