Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.15□□□□□ -1.75
BEST3Q8N1M1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 RNU1-20P-201ENST00000363314 162 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 RNA5SP391-201ENST00000363456 119 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AL356131.1-201ENST00000405826 414 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 RAP1BP1-201ENST00000412709 553 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AL136133.1-201ENST00000413694 376 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 LUZP4P1-201ENST00000415420 344 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 PDSS1P1-201ENST00000422953 1114 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 RPS29P17-201ENST00000430795 166 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 RPL23AP43-201ENST00000446445 471 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 CCDC75P1-201ENST00000469247 791 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC010618.1-201ENST00000469924 477 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 RPS3AP22-201ENST00000488297 769 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC093534.1-201ENST00000504977 132 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC010486.2-201ENST00000505572 483 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC104090.1-201ENST00000506341 1171 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC010587.2-201ENST00000511727 448 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 MTCO1P30-201ENST00000515244 580 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 RNA5SP360-201ENST00000516555 118 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 ARL2BPP5-201ENST00000523141 481 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC007834.2-201ENST00000536310 343 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC074029.1-201ENST00000552531 1044 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC015912.2-201ENST00000571053 181 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC005412.1-201ENST00000580812 1049 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 MIR3939-201ENST00000582614 106 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AL031281.1-201ENST00000604049 488 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC133552.5-201ENST00000604266 540 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC048344.4-201ENST00000619744 527 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 CU459211.1-201ENST00000635667 749 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 CPHL1P-201ENST00000461341 3407 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC114546.3-201ENST00000623582 1734 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC007529.1-201ENST00000418574 2178 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 AC107982.1-201ENST00000507171 1300 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.14□□□□□ -1.75
BEST3Q8N1M1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.14□□□□□ -1.75
BEST3Q8N1M1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RNU6-251P-201ENST00000363235 104 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RNU1-130P-201ENST00000363930 160 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RNU6-621P-201ENST00000364752 109 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 Y_RNA.311-201ENST00000365068 96 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 SNORA68.2-201ENST00000391263 128 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 DSTNP4-201ENST00000399472 474 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RSL24D1P4-201ENST00000400938 484 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AL078604.1-201ENST00000404609 466 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 RNU6-757P-201ENST00000410334 100 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AC092634.6-201ENST00000418558 192 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 MTCO3P1-205ENST00000422088 832 ntBASIC4.13□□□□□ -1.75
BEST3Q8N1M1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.13□□□□□ -1.75
BEST3Q8N1M1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms