Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL606490.7-201ENST00000433136 191 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 KCTD10P1-201ENST00000434203 625 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RPS26P40-201ENST00000435209 294 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 CYCSP43-201ENST00000438233 310 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RPS3AP46-201ENST00000448352 682 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RN7SL594P-201ENST00000470590 287 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 FCF1P3-201ENST00000496394 590 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 HMGN1P11-201ENST00000508668 303 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC005921.1-201ENST00000510589 286 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC108120.2-201ENST00000512973 294 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 SNORA70.17-201ENST00000516449 133 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RNU6-1308P-201ENST00000516817 103 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 OR4A2P-201ENST00000527276 913 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 DUXAP6-201ENST00000553858 601 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 Z82195.1-201ENST00000604558 398 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AL109618.2-201ENST00000605527 211 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 MIR8058-201ENST00000615737 89 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC011472.4-201ENST00000615848 491 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC022149.2-201ENST00000621061 203 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC006065.5-201ENST00000623427 349 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AC048347.1-201ENST00000624621 427 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 AL021368.2-201ENST00000606125 5352 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CDKL3Q8IVW4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.65□□□□□ -1.82
CDKL3Q8IVW4 AC138915.3-201ENST00000562908 1389 ntBASIC3.65□□□□□ -1.82
CDKL3Q8IVW4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.65□□□□□ -1.82
CDKL3Q8IVW4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.65□□□□□ -1.82
CDKL3Q8IVW4 MFSD8-233ENST00000641482 4860 ntBASIC3.65□□□□□ -1.82
CDKL3Q8IVW4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDKL3Q8IVW4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 U8.12-201ENST00000384701 133 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC009237.5-201ENST00000414271 501 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC068533.1-201ENST00000418542 415 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC244453.4-201ENST00000419150 388 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 SETP14-201ENST00000497538 873 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 HIGD1AP18-201ENST00000520730 278 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC074050.1-201ENST00000563247 211 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AL391497.1-201ENST00000608671 547 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 AC135803.1-201ENST00000608748 565 ntBASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CDKL3Q8IVW4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 SNORA31-201ENST00000362607 130 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 HMGB1P13-201ENST00000406019 642 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 RN7SKP27-201ENST00000410684 333 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 RN7SKP53-201ENST00000411337 315 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC004022.2-201ENST00000413824 193 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 MTND4P11-201ENST00000417020 1058 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC023512.1-201ENST00000444513 499 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 RN7SL330P-201ENST00000469709 307 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC007688.1-201ENST00000475592 759 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 RPL30P11-201ENST00000495304 339 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AL139174.1-201ENST00000531489 886 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC026333.2-201ENST00000542164 106 ntBASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL3Q8IVW4 MIR4425-201ENST00000580572 84 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms