Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SNORD6-201ENST00000365444 73 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 MTND4P22-201ENST00000413116 1169 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 TMSB10P2-201ENST00000416049 131 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 Z75741.2-201ENST00000417272 1167 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 RPF2P1-201ENST00000424137 906 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 NANOGP5-201ENST00000424456 877 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 HMGN2P7-201ENST00000456186 273 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 RPL5P24-201ENST00000463742 885 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC108729.1-201ENST00000487812 947 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 RN7SL812P-201ENST00000493791 279 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC100770.1-201ENST00000532310 322 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 RN7SL176P-201ENST00000580352 264 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 SNRPGP15-201ENST00000600149 222 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC068790.4-201ENST00000602474 263 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC090181.2-201ENST00000602975 672 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC025946.2-201ENST00000603398 234 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AL445435.1-201ENST00000604232 665 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AL356218.2-201ENST00000605264 187 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC090948.1-201ENST00000607464 549 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AL121895.2-201ENST00000619558 447 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC048347.1-201ENST00000624621 427 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 MFSD8-245ENST00000641743 948 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 AC005261.4-201ENST00000600047 1385 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
NUP54Q7Z3B4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUP54Q7Z3B4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.09□□□□□ -1.76
NUP54Q7Z3B4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NUP54Q7Z3B4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.09□□□□□ -1.76
NUP54Q7Z3B4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
NUP54Q7Z3B4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RNU1-108P-201ENST00000362556 161 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RNU6-335P-201ENST00000364563 113 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RNU6-837P-201ENST00000391056 108 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RNA5SP146-201ENST00000410743 123 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 SKP1P3-201ENST00000429280 487 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 USP9YP24-201ENST00000434374 697 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 USP9YP17-201ENST00000444617 696 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC112492.1-201ENST00000449607 712 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 ZNF37BP-203ENST00000452306 1352 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 DDX39BP2-208ENST00000453923 258 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RPL21P104-201ENST00000464143 478 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RN7SL481P-201ENST00000477764 299 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RN7SL810P-201ENST00000493031 276 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC010460.2-201ENST00000509054 677 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC048346.1-201ENST00000510247 144 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RNA5SP135-201ENST00000517019 125 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 RAB9BP1-201ENST00000519581 626 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 MIR5708-201ENST00000579723 85 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AL390816.3-201ENST00000604527 1066 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 HMGN2P28-201ENST00000606102 262 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 MIR6748-201ENST00000610433 71 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC009237.17-201ENST00000618111 748 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 MIR6891-201ENST00000618788 93 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AL157770.1-201ENST00000623049 439 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC124312.6-202ENST00000623624 418 ntBASIC4.08□□□□□ -1.76
NUP54Q7Z3B4 AC068787.1-201ENST00000623908 691 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms