Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.53□□□□□ -2.01
VPS13CQ709C8 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2.01
VPS13CQ709C8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.53□□□□□ -2.01
VPS13CQ709C8 DEFB122-202ENST00000569013 197 ntBASIC2.53□□□□□ -2.01
VPS13CQ709C8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.53□□□□□ -2.01
VPS13CQ709C8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.53□□□□□ -2.01
VPS13CQ709C8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.53□□□□□ -2.01
VPS13CQ709C8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
VPS13CQ709C8 FAM35DP-201ENST00000323387 2712 ntBASIC2.53□□□□□ -2.01
VPS13CQ709C8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13CQ709C8 AL645937.1-202ENST00000421799 937 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 MTND2P11-201ENST00000423638 648 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC099063.2-201ENST00000446360 662 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 TCP1P3-201ENST00000414406 1498 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13CQ709C8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 MIR196B-201ENST00000384852 84 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 JKAMPP1-201ENST00000413804 919 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC025445.1-201ENST00000502728 300 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13CQ709C8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13CQ709C8 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 CR381670.1-201ENST00000624291 1693 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 SNORD74.4-201ENST00000364129 80 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 MIR93-201ENST00000385024 80 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 AL139415.2-201ENST00000431968 163 ntBASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS13CQ709C8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13CQ709C8 RNA5SP146-201ENST00000410743 123 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 AL356968.1-201ENST00000416622 474 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 ISCA1P6-201ENST00000427740 390 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 AC025181.1-201ENST00000477507 416 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 RPL12P26-201ENST00000452430 487 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 RPL5P30-201ENST00000465511 891 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 PRDX3P4-201ENST00000470828 747 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 AC023389.2-201ENST00000580031 955 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 uc_338.1-201ENST00000612113 180 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 MIR184-201ENST00000384962 84 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 MIR34A-201ENST00000385130 110 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 SEPT7P2-202ENST00000398921 823 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 UBL5P3-201ENST00000475112 231 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 AP003122.3-201ENST00000526316 255 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 AC138761.3-201ENST00000579993 334 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 MIR622-201ENST00000638396 96 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 DCAF13P3-201ENST00000561147 1334 ntBASIC2.51□□□□□ -2.01
VPS13CQ709C8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13CQ709C8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13CQ709C8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC126124.2-201ENST00000413542 321 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 snoU13.15-201ENST00000459407 104 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 RPS4XP6-201ENST00000477670 797 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 IGKV3-31-201ENST00000523109 329 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC106785.3-201ENST00000564064 847 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 OR7A8P-201ENST00000595427 913 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 AC007619.2-201ENST00000605743 379 ntBASIC2.5□□□□□ -2.01
VPS13CQ709C8 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13CQ709C8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13CQ709C8 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms