Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
RNF43Q68DV7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 AC235565.1-201ENST00000456962 1325 ntBASIC5.97□□□□□ -1.45
RNF43Q68DV7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 AC006378.2-201ENST00000623178 2476 ntBASIC5.97□□□□□ -1.45
RNF43Q68DV7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF43Q68DV7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.96□□□□□ -1.45
RNF43Q68DV7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
RNF43Q68DV7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
RNF43Q68DV7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
RNF43Q68DV7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RNF43Q68DV7 CDY11P-201ENST00000447168 1651 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RNF43Q68DV7 SUGT1P1-201ENST00000379514 476 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 VN1R8P-201ENST00000407739 893 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 RNU2-47P-201ENST00000410649 186 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 RNU6-1148P-201ENST00000410992 104 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL357752.1-201ENST00000412817 349 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 SNRPFP1-201ENST00000414761 252 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL596448.1-201ENST00000415024 392 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL590806.1-201ENST00000415818 853 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC009161.1-201ENST00000417306 376 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC114814.2-201ENST00000419195 485 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 CBX3P6-201ENST00000430257 527 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 CFL1P1-202ENST00000432948 411 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 RPL7P29-201ENST00000437151 728 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 RPS23P9-201ENST00000448848 438 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 RPS27AP17-201ENST00000463344 455 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 OR2AO1P-201ENST00000476497 403 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 POU5F1P7-201ENST00000508759 541 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 RNA5SP401-201ENST00000515920 127 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 RNA5SP135-201ENST00000517019 125 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AP002812.4-201ENST00000532139 286 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL109766.1-201ENST00000555080 552 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 MIR544B-201ENST00000582372 78 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL109918.3-201ENST00000603072 338 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL356585.4-201ENST00000623078 1229 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AC063952.1-203ENST00000634410 658 ntBASIC5.96□□□□□ -1.46
RNF43Q68DV7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF43Q68DV7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF43Q68DV7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF43Q68DV7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
RNF43Q68DV7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RNF43Q68DV7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF43Q68DV7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AP001029.2-203ENST00000589795 4910 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AL159987.1-201ENST00000347911 293 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 RNU6-492P-201ENST00000363035 104 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 RNU6-216P-201ENST00000363282 104 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 Y_RNA.193-201ENST00000363979 102 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 RNA5SP187-201ENST00000384400 119 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 SETP9-201ENST00000423837 832 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AL606489.2-201ENST00000433886 234 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AL590399.4-201ENST00000436561 601 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 CBX1P1-201ENST00000440184 427 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF43Q68DV7 AL645937.3-201ENST00000453647 936 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC004129.2-201ENST00000457229 287 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 MTCO1P42-201ENST00000457379 726 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 MRPS17P3-201ENST00000465453 385 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC079080.1-201ENST00000479841 822 ntBASIC5.95□□□□□ -1.46
RNF43Q68DV7 AC073610.1-201ENST00000489971 396 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms