Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 VN1R85P-201ENST00000601587 426 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AL355816.2-201ENST00000610049 647 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AL050303.3-201ENST00000613704 284 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 MIR7973-1-201ENST00000614683 76 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX1Q15475 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX1Q15475 CDRT1-208ENST00000630868 794 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX1Q15475 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX1Q15475 MTND4P10-201ENST00000446199 1363 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX1Q15475 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SIX1Q15475 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
SIX1Q15475 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 RNU6-543P-201ENST00000362576 108 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 RNU5B-1-201ENST00000363286 116 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 Y_RNA.126-201ENST00000363382 111 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC019155.1-201ENST00000382242 574 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 RNA5SP424-201ENST00000390988 115 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SIX1Q15475 AC127526.1-201ENST00000417526 366 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX1Q15475 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX1Q15475 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX1Q15475 AC004854.1-201ENST00000440356 349 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 ARL5AP2-201ENST00000444698 533 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 CASP3P1-201ENST00000446037 609 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX1Q15475 AL606517.1-201ENST00000446914 387 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX1Q15475 TRAV31-201ENST00000502780 342 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC111193.1-201ENST00000504097 155 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 PCBP2P3-201ENST00000509726 843 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX1Q15475 AC110760.3-202ENST00000515177 371 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AP002812.4-201ENST00000532139 286 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX1Q15475 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC027104.1-201ENST00000563702 681 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 RN7SL339P-201ENST00000580597 296 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 ZNF92P3-201ENST00000596594 954 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX1Q15475 AC025946.2-201ENST00000603398 234 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC034229.4-201ENST00000607861 441 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AL354760.1-201ENST00000608357 643 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC093673.2-201ENST00000609674 331 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC024941.1-201ENST00000612250 334 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 uc_338.9-201ENST00000617424 182 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 AC022079.2-201ENST00000619739 566 ntBASIC3.85□□□□□ -1.79
SIX1Q15475 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX1Q15475 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX1Q15475 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX1Q15475 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
SIX1Q15475 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SIX1Q15475 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.85□□□□□ -1.79
SIX1Q15475 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SIX1Q15475 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SIX1Q15475 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SIX1Q15475 RNA5SP97-201ENST00000365006 84 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 U6.112-201ENST00000384129 70 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 SNORD65C-201ENST00000390962 71 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 RNU6-584P-201ENST00000410350 95 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 RNU6-628P-201ENST00000410675 107 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 HMGB3P20-201ENST00000417997 600 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC106883.1-201ENST00000418805 562 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX1Q15475 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX1Q15475 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.84□□□□□ -1.79
SIX1Q15475 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX1Q15475 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX1Q15475 AC104164.3-201ENST00000467363 1258 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.84□□□□□ -1.79
SIX1Q15475 RPS4XP6-201ENST00000477670 797 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 RN7SL809P-201ENST00000482040 297 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.84□□□□□ -1.79
SIX1Q15475 UBE2V1P12-201ENST00000503954 474 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX1Q15475 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SIX1Q15475 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.84□□□□□ -1.79
SIX1Q15475 AC021146.1-201ENST00000511202 716 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC026402.1-201ENST00000513642 170 ntBASIC3.84□□□□□ -1.79
SIX1Q15475 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms