Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSBP1Q04837 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SSBP1Q04837 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSBP1Q04837 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSBP1Q04837 RNU4-35P-201ENST00000362588 141 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 AL031121.1-201ENST00000406553 254 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.62□□□□□ -1.99
SSBP1Q04837 RPL26P29-201ENST00000415623 438 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSBP1Q04837 MUPP-201ENST00000438111 566 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 AC108734.1-201ENST00000439549 399 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 CCRL1P1-201ENST00000449542 1053 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 RPL7P38-201ENST00000488396 739 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 RN7SL20P-201ENST00000488827 297 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
SSBP1Q04837 CDH12P2-201ENST00000504393 298 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.62□□□□□ -1.99
SSBP1Q04837 RN7SKP13-201ENST00000515933 244 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.62□□□□□ -1.99
SSBP1Q04837 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.62□□□□□ -1.99
SSBP1Q04837 OR5G4P-201ENST00000525251 760 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.62□□□□□ -1.99
SSBP1Q04837 OR8R1P-201ENST00000543943 764 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.62□□□□□ -1.99
SSBP1Q04837 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.62□□□□□ -1.99
SSBP1Q04837 CCDC58P3-201ENST00000590792 430 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.62□□□□□ -1.99
SSBP1Q04837 AL139041.1-201ENST00000605480 610 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.62□□□□□ -1.99
SSBP1Q04837 RNA5SP196-201ENST00000625967 102 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 MIR6830-201ENST00000636015 70 ntBASIC2.62□□□□□ -1.99
SSBP1Q04837 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SSBP1Q04837 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.62□□□□□ -1.99
SSBP1Q04837 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
SSBP1Q04837 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSBP1Q04837 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SSBP1Q04837 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSBP1Q04837 AC005183.1-201ENST00000603687 1979 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSBP1Q04837 RPL21P17-201ENST00000397467 475 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 RPL7P25-201ENST00000404151 721 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.61□□□□□ -1.99
SSBP1Q04837 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.61□□□□□ -1.99
SSBP1Q04837 NEK4P1-201ENST00000433383 879 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.61□□□□□ -1.99
SSBP1Q04837 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 CEACAMP9-201ENST00000442990 513 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.61□□□□□ -1.99
SSBP1Q04837 AC069540.1-201ENST00000446320 988 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AC025518.1-201ENST00000479856 347 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 RN7SL499P-201ENST00000481141 276 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.61□□□□□ -1.99
SSBP1Q04837 AC034105.3-201ENST00000565294 442 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.61□□□□□ -1.99
SSBP1Q04837 RN7SL339P-201ENST00000580597 296 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.61□□□□□ -1.99
SSBP1Q04837 AC023043.3-201ENST00000593113 385 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AC104785.1-201ENST00000603220 588 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AC005972.3-201ENST00000606304 481 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSBP1Q04837 AC006338.2-201ENST00000616864 791 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.61□□□□□ -1.99
SSBP1Q04837 AL161912.2-201ENST00000565707 3007 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSBP1Q04837 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSBP1Q04837 AC138915.3-201ENST00000562908 1389 ntBASIC2.61□□□□□ -1.99
SSBP1Q04837 AC092447.7-201ENST00000422212 1621 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSBP1Q04837 MIR181B1-201ENST00000385240 110 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AL590004.2-201ENST00000404787 371 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 HMGN1P24-201ENST00000412282 298 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 OR1AA1P-201ENST00000419597 916 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AC007563.3-201ENST00000433233 371 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.6□□□□□ -1.99
SSBP1Q04837 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 RPL39P40-201ENST00000445481 146 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.6□□□□□ -1.99
SSBP1Q04837 CASP3P1-201ENST00000446037 609 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.6□□□□□ -1.99
SSBP1Q04837 RPS20P32-201ENST00000456044 356 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AC091179.1-201ENST00000461606 579 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 PRDX3P4-201ENST00000470828 747 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.6□□□□□ -1.99
SSBP1Q04837 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.6□□□□□ -1.99
SSBP1Q04837 AP000857.1-201ENST00000532151 543 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.6□□□□□ -1.99
SSBP1Q04837 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC2.6□□□□□ -1.99
SSBP1Q04837 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.6□□□□□ -1.99
SSBP1Q04837 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.6□□□□□ -1.99
SSBP1Q04837 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSBP1Q04837 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.6□□□□□ -1.99
SSBP1Q04837 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.6□□□□□ -1.99
SSBP1Q04837 OR2BH1P-201ENST00000608850 864 ntBASIC2.6□□□□□ -1.99
SSBP1Q04837 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SSBP1Q04837 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSBP1Q04837 SEPT7P7-201ENST00000420492 1301 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms