Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 MIR3611-201ENST00000584484 83 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC078795.2-201ENST00000602835 1252 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC020910.3-201ENST00000603701 874 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC133552.5-201ENST00000604266 540 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AP004247.3-201ENST00000608682 624 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC005332.10-201ENST00000612725 619 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 LINC00901.1-201ENST00000617252 152 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A1P61619 AL392088.2-201ENST00000637607 285 ntBASIC4.11□□□□□ -1.75
SEC61A1P61619 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A1P61619 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A1P61619 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A1P61619 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SEC61A1P61619 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC046144.1-201ENST00000478559 1853 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SEC61A1P61619 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 RNA5SP87-201ENST00000384155 118 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 CYB5AP4-201ENST00000396692 399 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SEC61A1P61619 RPL23AP47-201ENST00000408017 460 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 RN7SKP142-201ENST00000411236 328 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 TPMTP3-201ENST00000411928 735 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 TPT1P2-201ENST00000413105 503 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 MTCO2P34-201ENST00000421994 607 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AL050321.1-201ENST00000432363 400 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 MTCYBP39-201ENST00000437562 491 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 PPIAP17-201ENST00000438507 471 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AL450263.2-201ENST00000439400 589 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AC004865.1-201ENST00000442276 1003 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 UBA52P3-201ENST00000491303 382 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AC104685.1-201ENST00000502445 371 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 GAPDHP56-201ENST00000506031 988 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AC093281.2-201ENST00000510153 597 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 MTCO2P32-201ENST00000514865 403 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 RNU6-202P-201ENST00000515998 96 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 RNA5SP154-201ENST00000516193 111 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 RNU6-885P-201ENST00000516607 104 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AF279873.1-201ENST00000523393 313 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.1□□□□□ -1.75
SEC61A1P61619 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.1□□□□□ -1.75
SEC61A1P61619 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A1P61619 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AL121834.1-201ENST00000572284 509 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.1□□□□□ -1.75
SEC61A1P61619 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC073348.1-201ENST00000623002 331 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 PCMTD1P7-201ENST00000634506 357 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC011477.1-204ENST00000623416 1325 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC068254.2-201ENST00000623938 3577 ntBASIC4.1□□□□□ -1.75
SEC61A1P61619 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SEC61A1P61619 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.1□□□□□ -1.75
SEC61A1P61619 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SEC61A1P61619 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SEC61A1P61619 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEC61A1P61619 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SEC61A1P61619 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SEC61A1P61619 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SEC61A1P61619 AL672167.1-206ENST00000356293 943 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 RNU6-839P-201ENST00000363347 108 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 SNORA4.1-201ENST00000364263 144 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 RNU6-1300P-201ENST00000391046 108 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 RNU6-272P-201ENST00000411028 104 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 AF274854.1-201ENST00000413236 615 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 AC004022.2-201ENST00000413824 193 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 PRELID3BP11-201ENST00000414230 479 ntBASIC4.09□□□□□ -1.75
SEC61A1P61619 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.09□□□□□ -1.75
SEC61A1P61619 TBCAP2-201ENST00000416175 326 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms