Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RPL21P17-201ENST00000397467 475 ntBASIC4.07□□□□□ -1.76
PEX3P56589 HMGB1P13-201ENST00000406019 642 ntBASIC4.07□□□□□ -1.76
PEX3P56589 HSPE1P8-201ENST00000406997 288 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AL024507.1-201ENST00000412741 274 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC013404.1-201ENST00000413068 249 ntBASIC4.07□□□□□ -1.76
PEX3P56589 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.07□□□□□ -1.76
PEX3P56589 AL133547.1-201ENST00000448546 220 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.07□□□□□ -1.76
PEX3P56589 RPL21P71-201ENST00000465598 459 ntBASIC4.07□□□□□ -1.76
PEX3P56589 RPL21P18-201ENST00000469899 480 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC106872.2-201ENST00000494303 480 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC092045.1-201ENST00000495716 1231 ntBASIC4.07□□□□□ -1.76
PEX3P56589 NAMPTP2-201ENST00000505629 1115 ntBASIC4.07□□□□□ -1.76
PEX3P56589 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 HMGN1P11-201ENST00000508668 303 ntBASIC4.07□□□□□ -1.76
PEX3P56589 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PEX3P56589 RNU1-95P-201ENST00000516357 160 ntBASIC4.07□□□□□ -1.76
PEX3P56589 MIR2114-201ENST00000516645 80 ntBASIC4.07□□□□□ -1.76
PEX3P56589 RNU1-128P-201ENST00000516704 160 ntBASIC4.07□□□□□ -1.76
PEX3P56589 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 OR5AK3P-201ENST00000527486 1297 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AL121766.1-201ENST00000547436 487 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 GTF2IP22-201ENST00000554443 182 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC104072.1-201ENST00000568817 668 ntBASIC4.07□□□□□ -1.76
PEX3P56589 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.07□□□□□ -1.76
PEX3P56589 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.07□□□□□ -1.76
PEX3P56589 AC018645.2-201ENST00000609151 472 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AP005229.2-201ENST00000609980 697 ntBASIC4.07□□□□□ -1.76
PEX3P56589 RMST_10.1-201ENST00000616309 154 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC016957.2-201ENST00000616998 848 ntBASIC4.07□□□□□ -1.76
PEX3P56589 uc_338.9-201ENST00000617424 182 ntBASIC4.07□□□□□ -1.76
PEX3P56589 FRG1HP-204ENST00000617940 757 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AL049777.1-201ENST00000622740 518 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC034229.5-201ENST00000624258 185 ntBASIC4.07□□□□□ -1.76
PEX3P56589 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.07□□□□□ -1.76
PEX3P56589 AC012442.3-202ENST00000636742 206 ntBASIC4.07□□□□□ -1.76
PEX3P56589 AC119674.1-207ENST00000641355 633 ntBASIC4.07□□□□□ -1.76
PEX3P56589 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PEX3P56589 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PEX3P56589 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.06□□□□□ -1.76
PEX3P56589 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 RNA5SP322-201ENST00000363617 119 ntBASIC4.06□□□□□ -1.76
PEX3P56589 SNORA62.3-201ENST00000365110 153 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.06□□□□□ -1.76
PEX3P56589 RNU6-98P-201ENST00000384173 107 ntBASIC4.06□□□□□ -1.76
PEX3P56589 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PEX3P56589 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.06□□□□□ -1.76
PEX3P56589 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.06□□□□□ -1.76
PEX3P56589 HMGB3P20-201ENST00000417997 600 ntBASIC4.06□□□□□ -1.76
PEX3P56589 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.06□□□□□ -1.76
PEX3P56589 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 FO393414.1-201ENST00000428697 1184 ntBASIC4.06□□□□□ -1.76
PEX3P56589 FO393419.3-201ENST00000428741 282 ntBASIC4.06□□□□□ -1.76
PEX3P56589 GOT2P5-201ENST00000433995 546 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AL353597.2-202ENST00000434901 373 ntBASIC4.06□□□□□ -1.76
PEX3P56589 NDUFB1P1-201ENST00000435191 180 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.06□□□□□ -1.76
PEX3P56589 HMGB1P16-201ENST00000447155 540 ntBASIC4.06□□□□□ -1.76
PEX3P56589 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.06□□□□□ -1.76
PEX3P56589 DNAJC19P1-201ENST00000455312 319 ntBASIC4.06□□□□□ -1.76
PEX3P56589 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.06□□□□□ -1.76
PEX3P56589 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.06□□□□□ -1.76
PEX3P56589 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.06□□□□□ -1.76
PEX3P56589 BTF3L4P4-201ENST00000506381 449 ntBASIC4.06□□□□□ -1.76
PEX3P56589 RNU5A-7P-201ENST00000515979 116 ntBASIC4.06□□□□□ -1.76
PEX3P56589 RNU6-347P-201ENST00000516658 105 ntBASIC4.06□□□□□ -1.76
PEX3P56589 RN7SKP209-201ENST00000516888 304 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.06□□□□□ -1.76
PEX3P56589 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.06□□□□□ -1.76
PEX3P56589 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 AC007424.1-203ENST00000554613 687 ntBASIC4.06□□□□□ -1.76
PEX3P56589 MIR1254-2-201ENST00000579553 63 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AC010200.2-201ENST00000605098 235 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AC245100.7-201ENST00000609678 442 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AC008759.3-201ENST00000613300 508 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AC007275.1-201ENST00000621243 671 ntBASIC4.06□□□□□ -1.76
PEX3P56589 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
PEX3P56589 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 AP000553.6-201ENST00000641242 118 ntBASIC4.06□□□□□ -1.76
PEX3P56589 AC006504.1-201ENST00000562493 3666 ntBASIC4.06□□□□□ -1.76
PEX3P56589 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PEX3P56589 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PEX3P56589 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PEX3P56589 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PEX3P56589 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms