Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 HMGB1P13-201ENST00000406019 642 ntBASIC3.76□□□□□ -1.81
CDH6P55285 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 RNU2-65P-201ENST00000410162 185 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH6P55285 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH6P55285 AC245054.1-201ENST00000420944 258 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AL590623.1-201ENST00000427864 105 ntBASIC3.76□□□□□ -1.81
CDH6P55285 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH6P55285 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH6P55285 AP000873.1-201ENST00000463987 400 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AC007537.2-201ENST00000472093 511 ntBASIC3.76□□□□□ -1.81
CDH6P55285 TMED11P-201ENST00000479478 690 ntBASIC3.76□□□□□ -1.81
CDH6P55285 RPS3AP50-201ENST00000487064 803 ntBASIC3.76□□□□□ -1.81
CDH6P55285 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH6P55285 RPL23AP73-201ENST00000492507 471 ntBASIC3.76□□□□□ -1.81
CDH6P55285 RPL7P47-201ENST00000497299 556 ntBASIC3.76□□□□□ -1.81
CDH6P55285 UBE2CP3-201ENST00000502715 450 ntBASIC3.76□□□□□ -1.81
CDH6P55285 SNX5P1-201ENST00000505757 1041 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AC090071.1-201ENST00000507713 644 ntBASIC3.76□□□□□ -1.81
CDH6P55285 MTND4LP31-201ENST00000514859 294 ntBASIC3.76□□□□□ -1.81
CDH6P55285 SNORA31.13-201ENST00000516624 135 ntBASIC3.76□□□□□ -1.81
CDH6P55285 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH6P55285 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH6P55285 COX6B1P6-201ENST00000522347 255 ntBASIC3.76□□□□□ -1.81
CDH6P55285 HAUS1P3-201ENST00000523909 662 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH6P55285 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH6P55285 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.76□□□□□ -1.81
CDH6P55285 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 AC025260.1-201ENST00000548858 430 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.76□□□□□ -1.81
CDH6P55285 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH6P55285 AC006077.1-201ENST00000604746 343 ntBASIC3.76□□□□□ -1.81
CDH6P55285 MIR6798-201ENST00000612887 67 ntBASIC3.76□□□□□ -1.81
CDH6P55285 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH6P55285 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH6P55285 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 HSPA8P19-201ENST00000505359 1517 ntBASIC3.75□□□□□ -1.81
CDH6P55285 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH6P55285 ASNSP1-204ENST00000641977 1664 ntBASIC3.75□□□□□ -1.81
CDH6P55285 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CDH6P55285 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CDH6P55285 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 RNA5SP42-201ENST00000364278 115 ntBASIC3.75□□□□□ -1.81
CDH6P55285 U8.11-201ENST00000384699 133 ntBASIC3.75□□□□□ -1.81
CDH6P55285 U8.12-201ENST00000384701 133 ntBASIC3.75□□□□□ -1.81
CDH6P55285 MIR153-1-201ENST00000384914 90 ntBASIC3.75□□□□□ -1.81
CDH6P55285 AL356967.1-201ENST00000406305 431 ntBASIC3.75□□□□□ -1.81
CDH6P55285 RNU2-6P-201ENST00000411404 190 ntBASIC3.75□□□□□ -1.81
CDH6P55285 CYCSP19-201ENST00000411715 316 ntBASIC3.75□□□□□ -1.81
CDH6P55285 LINC01347-201ENST00000417964 355 ntBASIC3.75□□□□□ -1.81
CDH6P55285 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH6P55285 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH6P55285 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH6P55285 MRPS18BP2-201ENST00000434310 759 ntBASIC3.75□□□□□ -1.81
CDH6P55285 AC114878.1-201ENST00000441166 358 ntBASIC3.75□□□□□ -1.81
CDH6P55285 NOTCH2P1-201ENST00000443481 624 ntBASIC3.75□□□□□ -1.81
CDH6P55285 CFTRP1-201ENST00000456646 183 ntBASIC3.75□□□□□ -1.81
CDH6P55285 U8.18-201ENST00000459285 133 ntBASIC3.75□□□□□ -1.81
CDH6P55285 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.75□□□□□ -1.81
CDH6P55285 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH6P55285 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH6P55285 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH6P55285 IGKV2-23-201ENST00000518729 323 ntBASIC3.75□□□□□ -1.81
CDH6P55285 AC008562.1-201ENST00000521763 330 ntBASIC3.75□□□□□ -1.81
CDH6P55285 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH6P55285 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH6P55285 AC005242.1-201ENST00000585658 438 ntBASIC3.75□□□□□ -1.81
CDH6P55285 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH6P55285 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CDH6P55285 AC015849.2-201ENST00000605738 409 ntBASIC3.75□□□□□ -1.81
CDH6P55285 MIR6864-201ENST00000617935 70 ntBASIC3.75□□□□□ -1.81
CDH6P55285 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH6P55285 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CDH6P55285 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH6P55285 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH6P55285 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
CDH6P55285 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 RNA5SP235-201ENST00000365411 114 ntBASIC3.74□□□□□ -1.81
CDH6P55285 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH6P55285 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CDH6P55285 SNORD3H-201ENST00000384486 214 ntBASIC3.74□□□□□ -1.81
CDH6P55285 MIR142-201ENST00000384835 87 ntBASIC3.74□□□□□ -1.81
CDH6P55285 AC007066.1-201ENST00000392902 381 ntBASIC3.74□□□□□ -1.81
CDH6P55285 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms