Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.49□□□□□ -1.69
NR1H2P55055 AC067852.7-201ENST00000623270 535 ntBASIC4.49□□□□□ -1.69
NR1H2P55055 AC006065.5-201ENST00000623427 349 ntBASIC4.49□□□□□ -1.69
NR1H2P55055 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.49□□□□□ -1.69
NR1H2P55055 AP003485.2-201ENST00000623636 610 ntBASIC4.49□□□□□ -1.69
NR1H2P55055 AC112694.2-201ENST00000623697 768 ntBASIC4.49□□□□□ -1.69
NR1H2P55055 AC092184.1-201ENST00000625042 715 ntBASIC4.49□□□□□ -1.69
NR1H2P55055 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.49□□□□□ -1.69
NR1H2P55055 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NR1H2P55055 AL390862.1-201ENST00000635467 1469 ntBASIC4.49□□□□□ -1.69
NR1H2P55055 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.49□□□□□ -1.69
NR1H2P55055 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NR1H2P55055 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.49□□□□□ -1.69
NR1H2P55055 DCAF13P1-201ENST00000495256 1330 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 FAR2P2-201ENST00000413041 594 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC107081.1-201ENST00000414975 361 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 GJA6P-201ENST00000415117 1042 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 COX6B1P1-201ENST00000415962 213 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NR1H2P55055 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 Z74021.1-201ENST00000423610 407 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 FAR2P4-202ENST00000425399 584 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.48□□□□□ -1.69
NR1H2P55055 ATP5F1P1-201ENST00000433775 569 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 PRPF38AP2-201ENST00000438179 851 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 RPL21P134-201ENST00000453468 483 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AL121877.1-201ENST00000453704 622 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 MTND1P16-201ENST00000465177 898 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC092757.1-201ENST00000467293 467 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 RPS29P22-201ENST00000472363 168 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 RN7SL459P-201ENST00000481078 302 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 HMGN2P25-201ENST00000486956 268 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 RPS6P4-201ENST00000494693 758 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC119751.5-201ENST00000514077 770 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 C1GALT1P3-201ENST00000522049 819 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 AP001636.2-201ENST00000525517 696 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.48□□□□□ -1.69
NR1H2P55055 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.48□□□□□ -1.69
NR1H2P55055 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.48□□□□□ -1.69
NR1H2P55055 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 AC079171.1-201ENST00000568788 914 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC005412.1-201ENST00000580812 1049 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC008759.1-201ENST00000589783 983 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 RPL7P50-201ENST00000600588 727 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AL139344.1-201ENST00000605228 195 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 AC012414.7-202ENST00000622705 1090 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC079416.3-201ENST00000624479 549 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 AC017037.3-201ENST00000625016 472 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.48□□□□□ -1.69
NR1H2P55055 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 AL359893.1-201ENST00000447628 1580 ntBASIC4.48□□□□□ -1.69
NR1H2P55055 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NR1H2P55055 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
NR1H2P55055 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.47□□□□□ -1.69
NR1H2P55055 AL133412.1-201ENST00000380194 2992 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NR1H2P55055 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NR1H2P55055 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NR1H2P55055 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NR1H2P55055 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NR1H2P55055 AL133243.3-201ENST00000617415 3004 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NR1H2P55055 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
NR1H2P55055 OR56B2P-201ENST00000317102 954 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 Y_RNA.192-201ENST00000363977 102 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 Y_RNA.311-201ENST00000365068 96 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NR1H2P55055 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.47□□□□□ -1.69
NR1H2P55055 TIMM9P2-201ENST00000419324 266 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.47□□□□□ -1.69
NR1H2P55055 RPS12P5-201ENST00000423449 371 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 EI24P4-201ENST00000423683 1078 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 RPL23AP74-201ENST00000437246 471 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 MTND4P6-201ENST00000438297 472 ntBASIC4.47□□□□□ -1.69
NR1H2P55055 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.47□□□□□ -1.69
NR1H2P55055 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.47□□□□□ -1.69
NR1H2P55055 EXTL2P1-201ENST00000446218 416 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms