Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2A1P52655 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
GTF2A1P52655 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2A1P52655 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2A1P52655 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
GTF2A1P52655 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
GTF2A1P52655 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2A1P52655 MIR192-201ENST00000384915 110 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 SSXP9-201ENST00000417503 292 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 AC048351.1-201ENST00000420064 602 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 AL592293.2-201ENST00000422292 996 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 AL772161.1-201ENST00000439130 476 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2A1P52655 TPT1P12-201ENST00000448968 492 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 RPS23P7-201ENST00000466210 444 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 AC008571.1-201ENST00000467232 300 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 AC093840.1-201ENST00000511599 336 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 AC108471.1-201ENST00000513977 287 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 GMPSP1-201ENST00000514075 579 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2A1P52655 AC022695.1-201ENST00000522089 237 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 OR4A45P-201ENST00000529954 901 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2A1P52655 NPM1P45-201ENST00000583151 559 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2A1P52655 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2A1P52655 AP000787.2-201ENST00000604432 568 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 RPL23AP88-201ENST00000605759 454 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2A1P52655 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2A1P52655 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2A1P52655 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2A1P52655 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2A1P52655 AC012618.3-205ENST00000637896 1496 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 CCT8P1-201ENST00000413611 1657 ntBASIC3.32□□□□□ -1.88
GTF2A1P52655 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
GTF2A1P52655 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2A1P52655 AL161431.1-201ENST00000618966 4205 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.31□□□□□ -1.88
GTF2A1P52655 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GTF2A1P52655 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GTF2A1P52655 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GTF2A1P52655 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GTF2A1P52655 RNA5SP44-201ENST00000410446 133 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 RPL19P1-201ENST00000411635 428 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 OR8G2P-201ENST00000412796 908 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 RFESDP1-201ENST00000422350 461 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AC093084.1-201ENST00000424233 687 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GTF2A1P52655 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.31□□□□□ -1.88
GTF2A1P52655 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.31□□□□□ -1.88
GTF2A1P52655 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.31□□□□□ -1.88
GTF2A1P52655 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.31□□□□□ -1.88
GTF2A1P52655 RN7SL610P-201ENST00000463845 291 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.31□□□□□ -1.88
GTF2A1P52655 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.31□□□□□ -1.88
GTF2A1P52655 RPS3AP6-201ENST00000484430 795 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 RPS4XP15-201ENST00000489210 795 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AL139099.1-201ENST00000497398 403 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 HMGB1P21-201ENST00000502313 581 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.31□□□□□ -1.88
GTF2A1P52655 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GTF2A1P52655 AP001207.2-201ENST00000519490 539 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AC138701.1-201ENST00000524329 714 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AP003730.1-201ENST00000524605 285 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.31□□□□□ -1.88
GTF2A1P52655 HSPE1P20-201ENST00000538133 289 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.31□□□□□ -1.88
GTF2A1P52655 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.31□□□□□ -1.88
GTF2A1P52655 MIR4277-201ENST00000578298 84 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.31□□□□□ -1.88
GTF2A1P52655 AC053481.4-201ENST00000583164 216 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 SNORA62.6-201ENST00000606322 83 ntBASIC3.31□□□□□ -1.88
GTF2A1P52655 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.31□□□□□ -1.88
GTF2A1P52655 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.3□□□□□ -1.88
GTF2A1P52655 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
GTF2A1P52655 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.3□□□□□ -1.88
GTF2A1P52655 RNU1-70P-201ENST00000362618 164 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 SNORD88.1-201ENST00000408684 91 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 RAB9AP4-201ENST00000415230 609 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 AL096701.2-201ENST00000416920 238 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GTF2A1P52655 AC009965.2-201ENST00000425328 970 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.3□□□□□ -1.88
GTF2A1P52655 HMGN2P13-201ENST00000476476 274 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GTF2A1P52655 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.3□□□□□ -1.88
GTF2A1P52655 RNU6-826P-201ENST00000516827 104 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.3□□□□□ -1.88
GTF2A1P52655 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.3□□□□□ -1.88
GTF2A1P52655 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.3□□□□□ -1.88
GTF2A1P52655 AL109653.1-201ENST00000603091 248 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 AL354760.1-201ENST00000608357 643 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.3□□□□□ -1.88
GTF2A1P52655 AL445567.2-201ENST00000618935 498 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.3□□□□□ -1.88
GTF2A1P52655 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.3□□□□□ -1.88
GTF2A1P52655 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms