Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 U3.15-201ENST00000365398 212 ntBASIC4.92□□□□□ -1.62
NEK3P51956 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
NEK3P51956 RNU6-878P-201ENST00000384578 110 ntBASIC4.92□□□□□ -1.62
NEK3P51956 ATP5F1P4-201ENST00000397288 746 ntBASIC4.92□□□□□ -1.62
NEK3P51956 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.92□□□□□ -1.62
NEK3P51956 AL356131.1-201ENST00000405826 414 ntBASIC4.92□□□□□ -1.62
NEK3P51956 RAP1BP1-201ENST00000412709 553 ntBASIC4.92□□□□□ -1.62
NEK3P51956 TBCAP2-201ENST00000416175 326 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AC098592.1-201ENST00000419352 333 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.92□□□□□ -1.62
NEK3P51956 AL953862.1-201ENST00000423016 168 ntBASIC4.92□□□□□ -1.62
NEK3P51956 MTND4P20-201ENST00000424125 869 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AL035407.1-201ENST00000429211 571 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AC092162.1-201ENST00000432828 434 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.92□□□□□ -1.62
NEK3P51956 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.92□□□□□ -1.62
NEK3P51956 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.92□□□□□ -1.62
NEK3P51956 RPL23AP56-201ENST00000460778 453 ntBASIC4.92□□□□□ -1.62
NEK3P51956 PLGLA-201ENST00000465668 449 ntBASIC4.92□□□□□ -1.62
NEK3P51956 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
NEK3P51956 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.92□□□□□ -1.62
NEK3P51956 AC090453.1-201ENST00000495560 436 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.92□□□□□ -1.62
NEK3P51956 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.92□□□□□ -1.62
NEK3P51956 HMGB3P13-201ENST00000511263 607 ntBASIC4.92□□□□□ -1.62
NEK3P51956 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NEK3P51956 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.92□□□□□ -1.62
NEK3P51956 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.92□□□□□ -1.62
NEK3P51956 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 CYCSP2-201ENST00000558168 301 ntBASIC4.92□□□□□ -1.62
NEK3P51956 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 ISCA1P3-201ENST00000577104 373 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.92□□□□□ -1.62
NEK3P51956 AC068313.1-201ENST00000604028 1008 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AC087283.1-201ENST00000604029 1074 ntBASIC4.92□□□□□ -1.62
NEK3P51956 AL161616.1-201ENST00000611867 286 ntBASIC4.92□□□□□ -1.62
NEK3P51956 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.92□□□□□ -1.62
NEK3P51956 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 AC019226.2-201ENST00000625973 424 ntBASIC4.92□□□□□ -1.62
NEK3P51956 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
NEK3P51956 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NEK3P51956 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
NEK3P51956 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 AC097504.1-201ENST00000515103 2415 ntBASIC4.91□□□□□ -1.62
NEK3P51956 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 RNA5SP191-201ENST00000362585 102 ntBASIC4.91□□□□□ -1.62
NEK3P51956 RN7SKP115-201ENST00000363177 317 ntBASIC4.91□□□□□ -1.62
NEK3P51956 RNU6-374P-201ENST00000364146 108 ntBASIC4.91□□□□□ -1.62
NEK3P51956 SNORD82-201ENST00000365530 70 ntBASIC4.91□□□□□ -1.62
NEK3P51956 SNORD96B-201ENST00000386148 79 ntBASIC4.91□□□□□ -1.62
NEK3P51956 HSPD1P16-201ENST00000402302 394 ntBASIC4.91□□□□□ -1.62
NEK3P51956 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.91□□□□□ -1.62
NEK3P51956 RN7SKP100-201ENST00000411258 284 ntBASIC4.91□□□□□ -1.62
NEK3P51956 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 AC114755.2-201ENST00000413520 361 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.91□□□□□ -1.62
NEK3P51956 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.91□□□□□ -1.62
NEK3P51956 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.91□□□□□ -1.62
NEK3P51956 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.91□□□□□ -1.62
NEK3P51956 MTCYBP3-201ENST00000445588 1137 ntBASIC4.91□□□□□ -1.62
NEK3P51956 TDGF1P1-201ENST00000445734 527 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AL606662.1-201ENST00000445763 553 ntBASIC4.91□□□□□ -1.62
NEK3P51956 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 LINC00888-204ENST00000487386 421 ntBASIC4.91□□□□□ -1.62
NEK3P51956 IGLV2-34-201ENST00000490007 283 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AC012170.1-201ENST00000495139 359 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 AC147055.4-201ENST00000504399 745 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AC109458.1-201ENST00000508858 316 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AC093281.2-201ENST00000510153 597 ntBASIC4.91□□□□□ -1.62
NEK3P51956 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.91□□□□□ -1.62
NEK3P51956 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.91□□□□□ -1.62
NEK3P51956 IGKV1-32-201ENST00000519290 311 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 ELOCP32-201ENST00000548625 324 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NEK3P51956 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.91□□□□□ -1.62
NEK3P51956 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 AL133457.1-201ENST00000564251 987 ntBASIC4.91□□□□□ -1.62
NEK3P51956 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.91□□□□□ -1.62
NEK3P51956 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.91□□□□□ -1.62
NEK3P51956 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms