Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCNKAP51800 COX6CP18-201ENST00000448769 222 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCNKAP51800 MTND2P14-201ENST00000482139 351 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCNKAP51800 RNU5A-4P-201ENST00000516588 111 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 AC090151.1-201ENST00000520784 730 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 AC008562.1-201ENST00000521763 330 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCNKAP51800 CYCSP28-201ENST00000534284 321 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCNKAP51800 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCNKAP51800 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCNKAP51800 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCNKAP51800 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AL354943.1-201ENST00000572103 781 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 MIR4697-201ENST00000582977 78 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 MIR3138-201ENST00000585238 82 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCNKAP51800 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AC010201.1-201ENST00000605051 540 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 AC080013.3-201ENST00000606839 578 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 Z98200.1-201ENST00000607298 470 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AC114781.5-201ENST00000615297 108 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AL157770.1-201ENST00000623049 439 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCNKAP51800 CDRT1-208ENST00000630868 794 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLCNKAP51800 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLCNKAP51800 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AL353743.4-201ENST00000422653 1547 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCNKAP51800 AC018529.3-201ENST00000624212 2254 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLCNKAP51800 ASNSP1-204ENST00000641977 1664 ntBASIC4.29□□□□□ -1.72
CLCNKAP51800 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CLCNKAP51800 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.28□□□□□ -1.72
CLCNKAP51800 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCNKAP51800 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCNKAP51800 FAM3C2-201ENST00000312214 681 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 FAM133CP-201ENST00000332869 704 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 SNORD113-6-201ENST00000363345 75 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 RNU6-619P-201ENST00000365146 108 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 Y_RNA.465-201ENST00000384293 102 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AL049545.1-201ENST00000401856 572 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 HDGFP1-201ENST00000405943 252 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCNKAP51800 MTND4P22-201ENST00000413116 1169 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 UBTFL3-201ENST00000418934 1024 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 PAICSP7-201ENST00000419829 962 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 GTF2IP23-201ENST00000423746 351 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AL512326.1-201ENST00000443050 721 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 MTND2P22-201ENST00000444325 1033 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 OR6K5P-201ENST00000447050 945 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 NDUFS5P3-201ENST00000450668 321 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC009963.2-201ENST00000453431 138 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCNKAP51800 UBTFL6-201ENST00000477929 1024 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC091167.1-201ENST00000492017 396 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 HMGB1P21-201ENST00000502313 581 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCNKAP51800 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC109471.1-201ENST00000511631 612 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC093755.1-201ENST00000512950 1023 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC008837.2-201ENST00000513076 418 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC008494.2-201ENST00000514544 370 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 OR5BC1P-201ENST00000529327 739 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.28□□□□□ -1.72
CLCNKAP51800 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.28□□□□□ -1.72
CLCNKAP51800 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 OSBPL9P5-201ENST00000542581 171 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCNKAP51800 MRPS35P3-201ENST00000603189 709 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCNKAP51800 AP004247.3-201ENST00000608682 624 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 MIR3653-201ENST00000625572 110 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 MIR6830-201ENST00000636015 70 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 MIR1322-201ENST00000638013 71 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 AC105074.1-201ENST00000623380 3095 ntBASIC4.28□□□□□ -1.72
CLCNKAP51800 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms