Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 HMGB1P6-201ENST00000569046 646 ntBASIC5.59□□□□□ -1.52
SMARCA4P51532 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SMARCA4P51532 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA4P51532 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA4P51532 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SMARCA4P51532 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SMARCA4P51532 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMARCA4P51532 RPS4XP8-201ENST00000402039 771 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 AL391417.1-201ENST00000404100 426 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 HSPE1P16-201ENST00000426640 348 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.58□□□□□ -1.52
SMARCA4P51532 Z99127.3-201ENST00000448158 395 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 AC010469.1-201ENST00000463864 576 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 HMGB1P3-201ENST00000502802 616 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 RNA5SP367-201ENST00000516557 118 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA4P51532 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA4P51532 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA4P51532 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMARCA4P51532 AC000403.1-201ENST00000613696 3585 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA4P51532 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA4P51532 MTCO1P8-201ENST00000416914 1523 ntBASIC5.58□□□□□ -1.52
SMARCA4P51532 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.57□□□□□ -1.52
SMARCA4P51532 AC073069.1-201ENST00000428657 441 ntBASIC5.57□□□□□ -1.52
SMARCA4P51532 AC112492.1-201ENST00000449607 712 ntBASIC5.57□□□□□ -1.52
SMARCA4P51532 NPM1P13-201ENST00000452663 865 ntBASIC5.57□□□□□ -1.52
SMARCA4P51532 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.57□□□□□ -1.52
SMARCA4P51532 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.57□□□□□ -1.52
SMARCA4P51532 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SMARCA4P51532 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.56□□□□□ -1.52
SMARCA4P51532 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SMARCA4P51532 SLC31A1P1-201ENST00000451221 567 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 TRBV8-2-201ENST00000475637 270 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 BDH2P1-201ENST00000602288 736 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 OR2AS2P-201ENST00000606902 342 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 AL096803.3-201ENST00000609032 532 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 AL359535.1-201ENST00000612100 1087 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
SMARCA4P51532 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.56□□□□□ -1.52
SMARCA4P51532 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 AC017007.4-201ENST00000503353 1352 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.56□□□□□ -1.52
SMARCA4P51532 RNA5SP322-201ENST00000363617 119 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SMARCA4P51532 AL513174.1-201ENST00000423182 629 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.56□□□□□ -1.52
SMARCA4P51532 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.56□□□□□ -1.52
SMARCA4P51532 RPL23AP71-201ENST00000470966 469 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 AL035404.1-201ENST00000497982 568 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 RNU1-41P-201ENST00000516161 162 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 RNU1-48P-201ENST00000516400 162 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 AC099489.2-201ENST00000574976 260 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 AC067852.4-201ENST00000590314 478 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 uc_338.32-201ENST00000615087 172 ntBASIC5.56□□□□□ -1.52
SMARCA4P51532 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA4P51532 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMARCA4P51532 AC108206.1-201ENST00000570186 4159 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SMARCA4P51532 AL645937.1-202ENST00000421799 937 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 MTND2P11-201ENST00000423638 648 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA4P51532 AC108734.1-201ENST00000439549 399 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA4P51532 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA4P51532 PCBP2P3-201ENST00000509726 843 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.55□□□□□ -1.52
SMARCA4P51532 AC233702.9-201ENST00000581528 203 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.55□□□□□ -1.52
SMARCA4P51532 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.55□□□□□ -1.52
SMARCA4P51532 AC139713.2-210ENST00000641741 992 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.55□□□□□ -1.52
SMARCA4P51532 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SMARCA4P51532 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SMARCA4P51532 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMARCA4P51532 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.54□□□□□ -1.52
SMARCA4P51532 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.54□□□□□ -1.52
SMARCA4P51532 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.54□□□□□ -1.52
SMARCA4P51532 Y_RNA.638-201ENST00000459374 113 ntBASIC5.54□□□□□ -1.52
SMARCA4P51532 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.54□□□□□ -1.52
SMARCA4P51532 AC007619.2-201ENST00000605743 379 ntBASIC5.54□□□□□ -1.52
SMARCA4P51532 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.54□□□□□ -1.52
SMARCA4P51532 AP003122.5-201ENST00000527668 3766 ntBASIC5.54□□□□□ -1.52
SMARCA4P51532 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMARCA4P51532 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMARCA4P51532 AC007496.3-201ENST00000624987 3443 ntBASIC5.53□□□□□ -1.52
SMARCA4P51532 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMARCA4P51532 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMARCA4P51532 RPL7P25-201ENST00000404151 721 ntBASIC5.53□□□□□ -1.52
SMARCA4P51532 AC112653.1-201ENST00000443851 386 ntBASIC5.53□□□□□ -1.52
SMARCA4P51532 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.53□□□□□ -1.52
SMARCA4P51532 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMARCA4P51532 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.53□□□□□ -1.52
SMARCA4P51532 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms