Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GTF2IP4-201ENST00000453092 2054 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
RNF144AP50876 AC018628.1-201ENST00000624147 3819 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 CASC19-228ENST00000641414 1684 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF144AP50876 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF144AP50876 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF144AP50876 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF144AP50876 RNA5SP258-201ENST00000362750 119 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 MIR19A-201ENST00000384878 82 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RNF144AP50876 RNA5SP219-201ENST00000390940 113 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 AL024474.1-201ENST00000404655 591 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 MIR1302-6-201ENST00000408466 90 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 RN7SKP91-201ENST00000410852 288 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF144AP50876 COX6CP15-201ENST00000426313 211 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 RPS15AP10-201ENST00000432472 382 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 RPL21P2-201ENST00000440049 481 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 AC079922.1-201ENST00000443291 359 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 AL121578.2-201ENST00000448797 447 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF144AP50876 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF144AP50876 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF144AP50876 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF144AP50876 SNX18P24-201ENST00000505249 671 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 AC093878.1-201ENST00000515630 432 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF144AP50876 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF144AP50876 HSBP1P1-201ENST00000555205 166 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF144AP50876 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF144AP50876 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF144AP50876 RN7SL32P-201ENST00000580514 281 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 COX6CP3-201ENST00000580869 223 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF144AP50876 AL078624.2-201ENST00000605063 554 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 RPL12P48-201ENST00000605620 304 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 MIR6849-201ENST00000618543 69 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF144AP50876 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF144AP50876 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF144AP50876 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF144AP50876 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF144AP50876 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RNF144AP50876 AC105749.1-201ENST00000631338 2008 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 AC083837.1-201ENST00000565297 2994 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 AC233263.6-201ENST00000631132 1963 ntBASIC6.11□□□□□ -1.43
RNF144AP50876 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF144AP50876 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF144AP50876 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF144AP50876 AC134882.1-201ENST00000603738 1676 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 AC016583.1-201ENST00000624221 2431 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 THAP12P4-201ENST00000528321 2266 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RNF144AP50876 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RNF144AP50876 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF144AP50876 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF144AP50876 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF144AP50876 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RNF144AP50876 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.1□□□□□ -1.43
RNF144AP50876 RNU6-511P-201ENST00000363496 107 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 RN7SKP191-201ENST00000364713 306 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 DSTNP4-201ENST00000399472 474 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF144AP50876 AC139712.2-201ENST00000424302 339 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF144AP50876 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF144AP50876 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF144AP50876 AC103987.1-201ENST00000473394 348 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF144AP50876 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF144AP50876 AC009567.2-201ENST00000502989 349 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 AC114801.2-201ENST00000503825 781 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 RNU6-120P-201ENST00000516077 103 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 RNU6-1023P-201ENST00000516137 106 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 AC024224.1-201ENST00000538284 609 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF144AP50876 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF144AP50876 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF144AP50876 AC110743.1-201ENST00000584870 478 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 RPL23AP92-201ENST00000603609 255 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 RPS4XP21-201ENST00000603814 750 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 IGHV3-29-201ENST00000604817 344 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 AL445363.3-201ENST00000623080 671 ntBASIC6.1□□□□□ -1.43
RNF144AP50876 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RNF144AP50876 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF144AP50876 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms