Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFSF9P41273 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFSF9P41273 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFSF9P41273 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFSF9P41273 SNORA9-201ENST00000384215 133 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 RNU6-185P-201ENST00000384421 107 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 RNVU1-14-201ENST00000384770 164 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 MIR491-201ENST00000384877 84 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFSF9P41273 KRR1P1-201ENST00000419430 803 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFSF9P41273 AP000907.1-201ENST00000428428 510 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFSF9P41273 AC097713.2-201ENST00000430199 356 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 MTCO1P52-201ENST00000433928 531 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 TPMTP4-201ENST00000450749 678 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 MTCO3P16-201ENST00000454456 754 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.75□□□□□ -1.81
TNFSF9P41273 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFSF9P41273 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFSF9P41273 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFSF9P41273 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.75□□□□□ -1.81
TNFSF9P41273 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFSF9P41273 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFSF9P41273 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFSF9P41273 MIR4738-201ENST00000579134 87 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 AL355365.1-201ENST00000616480 294 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 MIR7975-201ENST00000619350 68 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFSF9P41273 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TNFSF9P41273 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFSF9P41273 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFSF9P41273 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFSF9P41273 NMD3P1-201ENST00000439704 1488 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 AC090229.1-201ENST00000590983 1609 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFSF9P41273 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TNFSF9P41273 AL049781.1-201ENST00000623195 3585 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 RNA5SP197-201ENST00000363357 119 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 MIR483-201ENST00000385070 76 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 PTMAP5-201ENST00000393073 333 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFSF9P41273 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFSF9P41273 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 HMGB1P3-201ENST00000502802 616 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC022790.1-201ENST00000522872 204 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 OR4U1P-201ENST00000554958 912 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 AL049870.4-201ENST00000555741 486 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.74□□□□□ -1.81
TNFSF9P41273 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TNFSF9P41273 AC115085.1-201ENST00000588924 229 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 BNIP3P38-201ENST00000601117 544 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 AC068790.5-201ENST00000602741 355 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 LINC00216-201ENST00000623548 1126 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 AC127502.3-201ENST00000636170 1206 ntBASIC3.74□□□□□ -1.81
TNFSF9P41273 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFSF9P41273 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TNFSF9P41273 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TNFSF9P41273 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
TNFSF9P41273 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFSF9P41273 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TNFSF9P41273 RNU1-33P-201ENST00000364249 162 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 RNU6-452P-201ENST00000384406 107 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AL603766.1-201ENST00000407763 664 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFSF9P41273 RPS24P8-201ENST00000431490 402 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFSF9P41273 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 ELOCP11-201ENST00000436690 332 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 ELOCP16-201ENST00000444494 332 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 RPS29P31-201ENST00000446147 164 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 MTND2P8-201ENST00000450555 1025 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 snoU13.24-201ENST00000458998 104 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 S100A11P1-201ENST00000477525 312 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC107398.1-201ENST00000486904 505 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 FCF1P3-201ENST00000496394 590 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.73□□□□□ -1.81
TNFSF9P41273 WBP1LP4-201ENST00000505043 344 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC026784.1-201ENST00000507986 352 ntBASIC3.73□□□□□ -1.81
TNFSF9P41273 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFSF9P41273 AP000926.4-201ENST00000527351 454 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms