Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RN7SL810P-201ENST00000493031 276 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.16□□□□□ -1.74
HNF4AP41235 SUMO2P5-201ENST00000506790 245 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 HNRNPKP5-201ENST00000515300 253 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 RAB9BP1-201ENST00000519581 626 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 MTND2P32-201ENST00000521584 1038 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 IFITM8P-201ENST00000522529 394 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 OR8G5-201ENST00000524943 1041 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC006064.5-201ENST00000541782 248 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC092470.1-201ENST00000546187 132 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AL109766.1-201ENST00000555080 552 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 NIFKP8-201ENST00000560500 874 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC074051.3-201ENST00000570238 358 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC068790.5-201ENST00000602741 355 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 HSPE1P14-201ENST00000605812 302 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC007546.1-201ENST00000619452 559 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC097520.1-201ENST00000624435 385 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC140479.6-201ENST00000633535 357 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.16□□□□□ -1.74
HNF4AP41235 AF001550.2-201ENST00000636643 217 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC013437.2-201ENST00000639587 677 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HNF4AP41235 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HNF4AP41235 ZNF734P-201ENST00000419494 1534 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC011266.1-201ENST00000624119 3569 ntBASIC4.15□□□□□ -1.74
HNF4AP41235 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HNF4AP41235 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HNF4AP41235 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HNF4AP41235 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HNF4AP41235 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HNF4AP41235 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HNF4AP41235 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HNF4AP41235 RNU1-32P-201ENST00000363937 159 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 RNA5SP513-201ENST00000364648 118 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
HNF4AP41235 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HNF4AP41235 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HNF4AP41235 RPS27AP7-201ENST00000422792 455 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 RPP40P1-201ENST00000426762 456 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 MTATP6P17-201ENST00000431030 672 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.15□□□□□ -1.75
HNF4AP41235 RPS3AP54-201ENST00000435535 734 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 RPL23AP52-201ENST00000439311 478 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.15□□□□□ -1.75
HNF4AP41235 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.15□□□□□ -1.75
HNF4AP41235 RN7SL98P-201ENST00000462271 300 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AC011276.1-201ENST00000469688 323 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AC091959.2-201ENST00000477363 321 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 RPL31P13-201ENST00000484151 370 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AC106872.2-201ENST00000494303 480 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.15□□□□□ -1.75
HNF4AP41235 AC093840.1-201ENST00000511599 336 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 IGLVIV-53-201ENST00000520107 367 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 AC107954.1-201ENST00000565906 727 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 MIR4789-201ENST00000577469 82 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.15□□□□□ -1.75
HNF4AP41235 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.15□□□□□ -1.75
HNF4AP41235 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.15□□□□□ -1.75
HNF4AP41235 AL354984.3-201ENST00000604803 325 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.15□□□□□ -1.75
HNF4AP41235 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HNF4AP41235 AL512427.1-201ENST00000618593 349 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AC093875.1-201ENST00000623688 504 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AP000770.2-201ENST00000623694 100 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.15□□□□□ -1.75
HNF4AP41235 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.15□□□□□ -1.75
HNF4AP41235 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.15□□□□□ -1.75
HNF4AP41235 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HNF4AP41235 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HNF4AP41235 FAM91A3P-201ENST00000456826 2544 ntBASIC4.15□□□□□ -1.75
HNF4AP41235 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
HNF4AP41235 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 AC016588.2-201ENST00000632484 3021 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 IQCB2P-201ENST00000401788 1633 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
HNF4AP41235 AL133383.2-201ENST00000622958 2336 ntBASIC4.14□□□□□ -1.75
HNF4AP41235 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HNF4AP41235 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms