Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.43□□□□□ -1.7
HADHAP40939 IGLV3-26-201ENST00000520756 302 ntBASIC4.43□□□□□ -1.7
HADHAP40939 OR5M7P-201ENST00000526140 972 ntBASIC4.43□□□□□ -1.7
HADHAP40939 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.43□□□□□ -1.7
HADHAP40939 OR8L1P-201ENST00000534005 955 ntBASIC4.43□□□□□ -1.7
HADHAP40939 LSM6P2-201ENST00000552208 177 ntBASIC4.43□□□□□ -1.7
HADHAP40939 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HADHAP40939 AL132857.1-201ENST00000555180 708 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.43□□□□□ -1.7
HADHAP40939 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.43□□□□□ -1.7
HADHAP40939 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.43□□□□□ -1.7
HADHAP40939 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 AL160290.3-201ENST00000604869 165 ntBASIC4.43□□□□□ -1.7
HADHAP40939 Z98200.1-201ENST00000607298 470 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AL157392.4-201ENST00000609756 345 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC024257.5-201ENST00000612739 531 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AL121873.1-201ENST00000616013 524 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC004825.2-201ENST00000616634 455 ntBASIC4.43□□□□□ -1.7
HADHAP40939 MIR6891-201ENST00000618788 93 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.43□□□□□ -1.7
HADHAP40939 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 AC068787.1-201ENST00000623908 691 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC098679.5-201ENST00000624394 571 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HADHAP40939 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HADHAP40939 LINC02211-204ENST00000642024 1070 ntBASIC4.43□□□□□ -1.7
HADHAP40939 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HADHAP40939 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HADHAP40939 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
HADHAP40939 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.43□□□□□ -1.7
HADHAP40939 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.43□□□□□ -1.7
HADHAP40939 DCAF13P1-201ENST00000495256 1330 ntBASIC4.43□□□□□ -1.7
HADHAP40939 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.43□□□□□ -1.7
HADHAP40939 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HADHAP40939 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
HADHAP40939 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.42□□□□□ -1.7
HADHAP40939 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 RNA5SP502-201ENST00000362694 119 ntBASIC4.42□□□□□ -1.7
HADHAP40939 snoZ40.1-201ENST00000364540 72 ntBASIC4.42□□□□□ -1.7
HADHAP40939 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HADHAP40939 SNORD65.1-201ENST00000390889 71 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AL161909.1-201ENST00000397390 712 ntBASIC4.42□□□□□ -1.7
HADHAP40939 RPS20P14-201ENST00000412545 360 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AL133384.1-201ENST00000412744 351 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.42□□□□□ -1.7
HADHAP40939 NANOGP5-201ENST00000424456 877 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.42□□□□□ -1.7
HADHAP40939 PRELID3BP10-201ENST00000431957 584 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC011998.1-201ENST00000433403 117 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.42□□□□□ -1.7
HADHAP40939 AL606517.1-201ENST00000446914 387 ntBASIC4.42□□□□□ -1.7
HADHAP40939 ABCF2P2-201ENST00000450549 296 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC025445.1-201ENST00000502728 300 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.42□□□□□ -1.7
HADHAP40939 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.42□□□□□ -1.7
HADHAP40939 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.42□□□□□ -1.7
HADHAP40939 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.42□□□□□ -1.7
HADHAP40939 AC093755.1-201ENST00000512950 1023 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC016065.2-201ENST00000514530 444 ntBASIC4.42□□□□□ -1.7
HADHAP40939 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.42□□□□□ -1.7
HADHAP40939 Vault.1-201ENST00000516474 102 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.42□□□□□ -1.7
HADHAP40939 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
HADHAP40939 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
HADHAP40939 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.42□□□□□ -1.7
HADHAP40939 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 AC135001.1-201ENST00000544546 283 ntBASIC4.42□□□□□ -1.7
HADHAP40939 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.42□□□□□ -1.7
HADHAP40939 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.42□□□□□ -1.7
HADHAP40939 AC005255.1-201ENST00000593748 216 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AL356218.2-201ENST00000605264 187 ntBASIC4.42□□□□□ -1.7
HADHAP40939 RNU4-5P-201ENST00000607255 135 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC027449.1-201ENST00000608890 407 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC015813.4-201ENST00000610469 179 ntBASIC4.42□□□□□ -1.7
HADHAP40939 AC012409.3-201ENST00000611343 981 ntBASIC4.42□□□□□ -1.7
HADHAP40939 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 AC019278.1-201ENST00000623516 479 ntBASIC4.42□□□□□ -1.7
HADHAP40939 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 AC117529.2-201ENST00000512159 2068 ntBASIC4.42□□□□□ -1.7
HADHAP40939 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
HADHAP40939 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HADHAP40939 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.42□□□□□ -1.7
HADHAP40939 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HADHAP40939 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HADHAP40939 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.41□□□□□ -1.7
HADHAP40939 MTCO1P24-201ENST00000515438 1558 ntBASIC4.41□□□□□ -1.7
HADHAP40939 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HADHAP40939 AC011266.1-201ENST00000624119 3569 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms