Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RPL23AP87-202ENST00000573039 466 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD13P35453 RNA5SP108-201ENST00000605921 117 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AC012603.1-201ENST00000606424 528 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD13P35453 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD13P35453 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC123767.1-202ENST00000620407 817 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 AC067852.7-201ENST00000623270 535 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXD13P35453 AC011266.1-201ENST00000624119 3569 ntBASIC4.52□□□□□ -1.69
HOXD13P35453 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXD13P35453 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXD13P35453 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXD13P35453 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXD13P35453 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD13P35453 RNU4-51P-201ENST00000364206 140 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 AC009237.2-201ENST00000421358 284 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 C1DP1-201ENST00000426049 402 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 PTGES3P3-201ENST00000511479 482 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 AC016065.2-201ENST00000514530 444 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
HOXD13P35453 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.51□□□□□ -1.69
HOXD13P35453 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 MTCYBP27-201ENST00000555160 670 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXD13P35453 IPO5P1-202ENST00000600039 287 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXD13P35453 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXD13P35453 AC098679.5-201ENST00000624394 571 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 MIR6830-201ENST00000636015 70 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXD13P35453 AC026951.1-201ENST00000559530 2459 ntBASIC4.51□□□□□ -1.69
HOXD13P35453 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXD13P35453 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD13P35453 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXD13P35453 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXD13P35453 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXD13P35453 ZNF962P-201ENST00000443465 3140 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXD13P35453 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 Z99496.1-201ENST00000469424 1477 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AL355578.1-201ENST00000607405 1328 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXD13P35453 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD13P35453 MTCO1P24-201ENST00000515438 1558 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 RNU11-4P-201ENST00000391149 133 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 PGBD4P8-201ENST00000412993 562 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 Z75741.2-201ENST00000417272 1167 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXD13P35453 MTCO1P54-201ENST00000430139 712 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXD13P35453 AC241584.1-201ENST00000438469 1241 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXD13P35453 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 SNORD108-201ENST00000459332 71 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD13P35453 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 AC010301.1-201ENST00000473936 355 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXD13P35453 RPS6P4-201ENST00000494693 758 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 AC017037.1-201ENST00000508460 471 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 VWA8P1-201ENST00000510889 176 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXD13P35453 RN7SKP122-201ENST00000515923 296 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 OR5M7P-201ENST00000526140 972 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXD13P35453 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXD13P35453 MTCYBP23-201ENST00000558717 1102 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXD13P35453 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXD13P35453 GAS5-AS1-201ENST00000602767 694 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AC083899.3-201ENST00000603413 594 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 YWHAQP7-201ENST00000603536 658 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AC016597.2-201ENST00000613256 341 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 AC090246.1-201ENST00000616499 426 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD13P35453 AC090772.4-201ENST00000623599 362 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AP005264.7-201ENST00000625003 745 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 AC010608.3-201ENST00000625048 527 ntBASIC4.5□□□□□ -1.69
HOXD13P35453 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms