Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC018638.7-201ENST00000605836 1114 ntBASIC4.56□□□□□ -1.68
RFC1P35251 MIR6820-201ENST00000611508 62 ntBASIC4.56□□□□□ -1.68
RFC1P35251 AC023158.2-201ENST00000614876 543 ntBASIC4.56□□□□□ -1.68
RFC1P35251 AL021997.2-201ENST00000615674 271 ntBASIC4.56□□□□□ -1.68
RFC1P35251 RN7SL722P-201ENST00000617780 284 ntBASIC4.56□□□□□ -1.68
RFC1P35251 RN7SL565P-201ENST00000618246 284 ntBASIC4.56□□□□□ -1.68
RFC1P35251 AC007546.1-201ENST00000619452 559 ntBASIC4.56□□□□□ -1.68
RFC1P35251 AC019278.1-201ENST00000623516 479 ntBASIC4.56□□□□□ -1.68
RFC1P35251 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RFC1P35251 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.56□□□□□ -1.68
RFC1P35251 ASNSP1-204ENST00000641977 1664 ntBASIC4.56□□□□□ -1.68
RFC1P35251 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RFC1P35251 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC1P35251 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFC1P35251 AC018529.3-201ENST00000624212 2254 ntBASIC4.56□□□□□ -1.68
RFC1P35251 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RFC1P35251 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RFC1P35251 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RFC1P35251 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 RNU1-108P-201ENST00000362556 161 ntBASIC4.55□□□□□ -1.68
RFC1P35251 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.55□□□□□ -1.68
RFC1P35251 RNU6-560P-201ENST00000364007 108 ntBASIC4.55□□□□□ -1.68
RFC1P35251 RNU6-157P-201ENST00000383957 107 ntBASIC4.55□□□□□ -1.68
RFC1P35251 Y_RNA.465-201ENST00000384293 102 ntBASIC4.55□□□□□ -1.68
RFC1P35251 SNORD65.1-201ENST00000390889 71 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AL583835.1-201ENST00000399570 407 ntBASIC4.55□□□□□ -1.68
RFC1P35251 SNORA11F-201ENST00000408237 128 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.55□□□□□ -1.68
RFC1P35251 RPL26P29-201ENST00000415623 438 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AL365338.1-201ENST00000422282 858 ntBASIC4.55□□□□□ -1.68
RFC1P35251 RPS27AP7-201ENST00000422792 455 ntBASIC4.55□□□□□ -1.68
RFC1P35251 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.55□□□□□ -1.68
RFC1P35251 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 AC104306.1-201ENST00000449702 371 ntBASIC4.55□□□□□ -1.68
RFC1P35251 Z99714.1-201ENST00000450463 807 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AL133217.1-201ENST00000450980 425 ntBASIC4.55□□□□□ -1.68
RFC1P35251 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 AC079804.1-201ENST00000461922 436 ntBASIC4.55□□□□□ -1.68
RFC1P35251 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 RN7SL738P-201ENST00000470264 297 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AC105313.1-201ENST00000509121 353 ntBASIC4.55□□□□□ -1.68
RFC1P35251 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 MRPS33P3-201ENST00000513456 322 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AC008494.2-201ENST00000514544 370 ntBASIC4.55□□□□□ -1.68
RFC1P35251 Y_RNA.688-201ENST00000516565 95 ntBASIC4.55□□□□□ -1.68
RFC1P35251 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC1P35251 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 COX6B1P6-201ENST00000522347 255 ntBASIC4.55□□□□□ -1.68
RFC1P35251 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
RFC1P35251 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.55□□□□□ -1.68
RFC1P35251 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 PHBP17-201ENST00000528576 541 ntBASIC4.55□□□□□ -1.68
RFC1P35251 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 AC010198.2-201ENST00000550612 259 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AC004217.3-201ENST00000551552 878 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 BPTFP1-201ENST00000579209 492 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AC090312.2-201ENST00000582687 378 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC1P35251 AC067852.4-201ENST00000590314 478 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AC115621.1-201ENST00000604653 858 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AL133507.1-201ENST00000605269 557 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AP004247.3-201ENST00000608682 624 ntBASIC4.55□□□□□ -1.68
RFC1P35251 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC1P35251 uc_338.13-201ENST00000618243 179 ntBASIC4.55□□□□□ -1.68
RFC1P35251 AC243756.2-201ENST00000618406 463 ntBASIC4.55□□□□□ -1.68
RFC1P35251 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.55□□□□□ -1.68
RFC1P35251 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC1P35251 AC105074.1-201ENST00000623380 3095 ntBASIC4.55□□□□□ -1.68
RFC1P35251 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.54□□□□□ -1.68
RFC1P35251 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RFC1P35251 MTND4P26-201ENST00000415971 1359 ntBASIC4.54□□□□□ -1.68
RFC1P35251 AC007390.2-201ENST00000606229 3803 ntBASIC4.54□□□□□ -1.68
RFC1P35251 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFC1P35251 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RFC1P35251 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.54□□□□□ -1.68
RFC1P35251 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RFC1P35251 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFC1P35251 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RFC1P35251 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RFC1P35251 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
RFC1P35251 AC068254.2-201ENST00000623938 3577 ntBASIC4.54□□□□□ -1.68
RFC1P35251 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFC1P35251 RNA5SP175-201ENST00000364275 119 ntBASIC4.54□□□□□ -1.68
RFC1P35251 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.54□□□□□ -1.68
RFC1P35251 Y_RNA.408-201ENST00000383987 102 ntBASIC4.54□□□□□ -1.68
RFC1P35251 MIR217-201ENST00000384817 110 ntBASIC4.54□□□□□ -1.68
RFC1P35251 GSTA8P-201ENST00000404253 637 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms