Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CKS2P33552 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.43□□□□□ -2.02
CKS2P33552 AC090337.1-201ENST00000579651 2074 ntBASIC2.43□□□□□ -2.02
CKS2P33552 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.43□□□□□ -2.02
CKS2P33552 DYNLT3P1-201ENST00000378574 347 ntBASIC2.43□□□□□ -2.02
CKS2P33552 RNU6-532P-201ENST00000384318 107 ntBASIC2.43□□□□□ -2.02
CKS2P33552 MIR30B-201ENST00000384850 88 ntBASIC2.43□□□□□ -2.02
CKS2P33552 NDUFB4P5-201ENST00000415445 361 ntBASIC2.43□□□□□ -2.02
CKS2P33552 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CKS2P33552 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.43□□□□□ -2.02
CKS2P33552 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.43□□□□□ -2.02
CKS2P33552 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.43□□□□□ -2.02
CKS2P33552 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.43□□□□□ -2.02
CKS2P33552 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.43□□□□□ -2.02
CKS2P33552 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.43□□□□□ -2.02
CKS2P33552 RN7SL75P-201ENST00000461926 281 ntBASIC2.43□□□□□ -2.02
CKS2P33552 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.43□□□□□ -2.02
CKS2P33552 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.43□□□□□ -2.02
CKS2P33552 AC112198.1-201ENST00000505369 1220 ntBASIC2.43□□□□□ -2.02
CKS2P33552 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.43□□□□□ -2.02
CKS2P33552 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.43□□□□□ -2.02
CKS2P33552 FTH1P21-201ENST00000512179 511 ntBASIC2.43□□□□□ -2.02
CKS2P33552 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.43□□□□□ -2.02
CKS2P33552 SOD1P3-201ENST00000518682 454 ntBASIC2.43□□□□□ -2.02
CKS2P33552 MTCO1P49-201ENST00000523429 802 ntBASIC2.43□□□□□ -2.02
CKS2P33552 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.43□□□□□ -2.02
CKS2P33552 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.43□□□□□ -2.02
CKS2P33552 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CKS2P33552 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.43□□□□□ -2.02
CKS2P33552 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.43□□□□□ -2.02
CKS2P33552 AC087499.8-201ENST00000578406 226 ntBASIC2.43□□□□□ -2.02
CKS2P33552 MIR4506-201ENST00000584693 77 ntBASIC2.43□□□□□ -2.02
CKS2P33552 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.43□□□□□ -2.02
CKS2P33552 AC113194.1-201ENST00000606037 500 ntBASIC2.43□□□□□ -2.02
CKS2P33552 SNORA51-201ENST00000606420 132 ntBASIC2.43□□□□□ -2.02
CKS2P33552 AL391497.1-201ENST00000608671 547 ntBASIC2.43□□□□□ -2.02
CKS2P33552 uc_338.1-201ENST00000612113 180 ntBASIC2.43□□□□□ -2.02
CKS2P33552 AC091903.1-201ENST00000624322 454 ntBASIC2.43□□□□□ -2.02
CKS2P33552 OR52H1-202ENST00000641796 1061 ntBASIC2.43□□□□□ -2.02
CKS2P33552 MTND5P19-201ENST00000424872 1794 ntBASIC2.43□□□□□ -2.02
CKS2P33552 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CKS2P33552 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CKS2P33552 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CKS2P33552 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS2P33552 AC007256.1-201ENST00000392253 2765 ntBASIC2.42□□□□□ -2.02
CKS2P33552 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKS2P33552 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CKS2P33552 AC012618.3-205ENST00000637896 1496 ntBASIC2.42□□□□□ -2.02
CKS2P33552 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CKS2P33552 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKS2P33552 SNORA46-201ENST00000384762 135 ntBASIC2.42□□□□□ -2.02
CKS2P33552 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKS2P33552 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.42□□□□□ -2.02
CKS2P33552 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.42□□□□□ -2.02
CKS2P33552 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.42□□□□□ -2.02
CKS2P33552 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS2P33552 HMGB3P6-201ENST00000444896 598 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AL133162.1-201ENST00000463228 453 ntBASIC2.42□□□□□ -2.02
CKS2P33552 RPS7P7-201ENST00000463499 571 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AC093267.1-201ENST00000489176 961 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS2P33552 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS2P33552 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS2P33552 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS2P33552 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS2P33552 PTGES3P3-201ENST00000511479 482 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.42□□□□□ -2.02
CKS2P33552 RN7SKP234-201ENST00000517173 224 ntBASIC2.42□□□□□ -2.02
CKS2P33552 RNU4-60P-201ENST00000517239 135 ntBASIC2.42□□□□□ -2.02
CKS2P33552 SCARNA20.6-201ENST00000517251 106 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS2P33552 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.42□□□□□ -2.02
CKS2P33552 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS2P33552 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.42□□□□□ -2.02
CKS2P33552 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.42□□□□□ -2.02
CKS2P33552 AC018754.1-201ENST00000607486 925 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AC112503.1-201ENST00000608436 391 ntBASIC2.42□□□□□ -2.02
CKS2P33552 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.42□□□□□ -2.02
CKS2P33552 RMST_5.1-201ENST00000618704 126 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AC092159.4-201ENST00000624944 550 ntBASIC2.42□□□□□ -2.02
CKS2P33552 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS2P33552 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.42□□□□□ -2.02
CKS2P33552 MIR492-201ENST00000638676 116 ntBASIC2.42□□□□□ -2.02
CKS2P33552 ZNF33CP-201ENST00000432492 2030 ntBASIC2.42□□□□□ -2.02
CKS2P33552 AL353743.4-201ENST00000422653 1547 ntBASIC2.42□□□□□ -2.02
CKS2P33552 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKS2P33552 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.41□□□□□ -2.02
CKS2P33552 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CKS2P33552 AC093831.2-201ENST00000624393 3427 ntBASIC2.41□□□□□ -2.02
CKS2P33552 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CKS2P33552 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.41□□□□□ -2.02
CKS2P33552 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CKS2P33552 RPL23AP47-201ENST00000408017 460 ntBASIC2.41□□□□□ -2.02
CKS2P33552 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.41□□□□□ -2.02
CKS2P33552 AC012498.1-201ENST00000424037 437 ntBASIC2.41□□□□□ -2.02
CKS2P33552 OR8F1P-201ENST00000425243 930 ntBASIC2.41□□□□□ -2.02
CKS2P33552 TRGV7-201ENST00000427089 353 ntBASIC2.41□□□□□ -2.02
CKS2P33552 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.41□□□□□ -2.02
CKS2P33552 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms