Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RPL9P32-201ENST00000464118 620 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC068305.1-201ENST00000497406 726 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 TRAV31-201ENST00000502780 342 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC13P31276 HMGN1P15-201ENST00000513870 295 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 RNA5SP519-201ENST00000516480 119 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 PHBP17-201ENST00000528576 541 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC13P31276 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC13P31276 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC13P31276 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC13P31276 AC023824.3-201ENST00000569003 562 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AGGF1P6-201ENST00000569213 976 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 RN7SL622P-201ENST00000585292 275 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC13P31276 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 AP002906.1-201ENST00000603405 233 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AL161729.3-201ENST00000603533 673 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC097065.2-201ENST00000608159 533 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 FAM27D1-201ENST00000612308 341 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC022306.3-201ENST00000619930 550 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 MIR8059-201ENST00000620427 81 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC022079.1-201ENST00000621546 602 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC034229.5-201ENST00000624258 185 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AL109659.3-201ENST00000624985 950 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC008993.2-201ENST00000631744 806 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 AC008013.2-202ENST00000637965 364 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC13P31276 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 AC015813.6-201ENST00000624409 5808 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC13P31276 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HOXC13P31276 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC13P31276 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 LINC01355-201ENST00000566551 5444 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC13P31276 AC011266.1-201ENST00000624119 3569 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HOXC13P31276 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 AC067945.1-201ENST00000342609 618 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 RNA5SP513-201ENST00000364648 118 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 SNORA62.3-201ENST00000365110 153 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HOXC13P31276 U6.112-201ENST00000384129 70 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 MIR554-201ENST00000384874 96 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXC13P31276 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXC13P31276 DSTNP4-201ENST00000399472 474 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 LAP3P1-201ENST00000403648 294 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 HMGB3P19-201ENST00000403971 560 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 RNA5SP36-201ENST00000410197 133 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 RPS3AP25-201ENST00000411660 793 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC13P31276 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC13P31276 AL354692.1-201ENST00000423044 315 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 AL445584.1-201ENST00000431451 330 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 RPS26P30-201ENST00000443431 335 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC13P31276 RPL23AP81-201ENST00000455252 467 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 HMGN2P7-201ENST00000456186 273 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 AC079804.1-201ENST00000461922 436 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 RPL7P22-201ENST00000466005 733 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 AP000893.1-201ENST00000474462 794 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
HOXC13P31276 GAPDHP36-201ENST00000480688 918 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 AC010374.2-201ENST00000512933 535 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXC13P31276 PRELID3BP4-201ENST00000515476 571 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 IGLVIV-53-201ENST00000520107 367 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
HOXC13P31276 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC13P31276 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXC13P31276 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXC13P31276 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXC13P31276 MTCYBP28-201ENST00000566728 1132 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 MIR4504-201ENST00000577413 92 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXC13P31276 AL158050.2-201ENST00000605336 568 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXC13P31276 AC022960.3-201ENST00000619794 441 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 MIR7154-201ENST00000620673 73 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.42□□□□□ -1.7
HOXC13P31276 AC048347.1-201ENST00000624621 427 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 MIR4278-201ENST00000636094 69 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC13P31276 AC092435.4-201ENST00000623012 4159 ntBASIC4.42□□□□□ -1.7
HOXC13P31276 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC13P31276 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms