Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL391840.1-201ENST00000571144 367 ntBASIC6.53□□□□□ -1.36
RXRBP28702 MIR3913-1-201ENST00000577744 102 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AL360012.1-201ENST00000602813 131 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AC233280.2-201ENST00000603917 1070 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AL020991.1-201ENST00000612314 373 ntBASIC6.53□□□□□ -1.36
RXRBP28702 SNX18P1Y-201ENST00000616231 511 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AC009233.1-201ENST00000616477 371 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AC018816.2-201ENST00000621460 353 ntBASIC6.53□□□□□ -1.36
RXRBP28702 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RXRBP28702 AC011815.3-201ENST00000624194 473 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AC032011.1-201ENST00000611703 1549 ntBASIC6.53□□□□□ -1.36
RXRBP28702 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRBP28702 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RXRBP28702 AC025031.4-201ENST00000621248 3271 ntBASIC6.53□□□□□ -1.36
RXRBP28702 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
RXRBP28702 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRBP28702 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRBP28702 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRBP28702 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
RXRBP28702 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
RXRBP28702 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 AC015799.1-201ENST00000622996 3122 ntBASIC6.52□□□□□ -1.37
RXRBP28702 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRBP28702 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.52□□□□□ -1.37
RXRBP28702 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
RXRBP28702 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.52□□□□□ -1.37
RXRBP28702 RNU6-543P-201ENST00000362576 108 ntBASIC6.52□□□□□ -1.37
RXRBP28702 SNORA63-201ENST00000363450 132 ntBASIC6.52□□□□□ -1.37
RXRBP28702 Y_RNA.160-201ENST00000363677 92 ntBASIC6.52□□□□□ -1.37
RXRBP28702 RNU6-534P-201ENST00000364877 106 ntBASIC6.52□□□□□ -1.37
RXRBP28702 Y_RNA.326-201ENST00000365176 113 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AC007066.1-201ENST00000392902 381 ntBASIC6.52□□□□□ -1.37
RXRBP28702 PPIAP31-201ENST00000405422 495 ntBASIC6.52□□□□□ -1.37
RXRBP28702 FAT1P1-201ENST00000406588 507 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRBP28702 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRBP28702 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRBP28702 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 NDUFA5P4-201ENST00000436704 385 ntBASIC6.52□□□□□ -1.37
RXRBP28702 RPS4XP4-201ENST00000443195 763 ntBASIC6.52□□□□□ -1.37
RXRBP28702 MTCO3P11-201ENST00000455103 774 ntBASIC6.52□□□□□ -1.37
RXRBP28702 SNORA59A-201ENST00000459326 152 ntBASIC6.52□□□□□ -1.37
RXRBP28702 SLC25A51P1-201ENST00000468432 871 ntBASIC6.52□□□□□ -1.37
RXRBP28702 RPS29P25-201ENST00000481709 171 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRBP28702 AC138409.2-202ENST00000507274 458 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRBP28702 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRBP28702 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.52□□□□□ -1.37
RXRBP28702 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRBP28702 AL591034.3-201ENST00000605511 685 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AC090948.1-201ENST00000607464 549 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AC093388.1-201ENST00000609166 430 ntBASIC6.52□□□□□ -1.37
RXRBP28702 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRBP28702 AC002550.2-201ENST00000621246 394 ntBASIC6.52□□□□□ -1.37
RXRBP28702 RPL23AP61-201ENST00000623642 466 ntBASIC6.52□□□□□ -1.37
RXRBP28702 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.52□□□□□ -1.37
RXRBP28702 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.52□□□□□ -1.37
RXRBP28702 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RXRBP28702 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RXRBP28702 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.51□□□□□ -1.37
RXRBP28702 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RXRBP28702 RNU6-501P-201ENST00000364072 100 ntBASIC6.51□□□□□ -1.37
RXRBP28702 Y_RNA.295-201ENST00000364918 102 ntBASIC6.51□□□□□ -1.37
RXRBP28702 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 Y_RNA.402-201ENST00000383972 102 ntBASIC6.51□□□□□ -1.37
RXRBP28702 RNU6-1227P-201ENST00000383981 107 ntBASIC6.51□□□□□ -1.37
RXRBP28702 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.51□□□□□ -1.37
RXRBP28702 RN7SKP285-201ENST00000410137 318 ntBASIC6.51□□□□□ -1.37
RXRBP28702 HMGB3P23-201ENST00000414981 585 ntBASIC6.51□□□□□ -1.37
RXRBP28702 AL354751.2-201ENST00000415471 210 ntBASIC6.51□□□□□ -1.37
RXRBP28702 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.51□□□□□ -1.37
RXRBP28702 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.51□□□□□ -1.37
RXRBP28702 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.51□□□□□ -1.37
RXRBP28702 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.51□□□□□ -1.37
RXRBP28702 AC105137.1-201ENST00000484355 562 ntBASIC6.51□□□□□ -1.37
RXRBP28702 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.51□□□□□ -1.37
RXRBP28702 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms