Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
GDF1P27539 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GDF1P27539 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GDF1P27539 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
GDF1P27539 LINC02471-203ENST00000641941 4752 ntBASIC3.58□□□□□ -1.84
GDF1P27539 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
GDF1P27539 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 AP001486.2-201ENST00000561652 5113 ntBASIC3.57□□□□□ -1.84
GDF1P27539 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
GDF1P27539 RNU5B-1-201ENST00000363286 116 ntBASIC3.57□□□□□ -1.84
GDF1P27539 U3.15-201ENST00000365398 212 ntBASIC3.57□□□□□ -1.84
GDF1P27539 RHOT1P2-201ENST00000366423 333 ntBASIC3.57□□□□□ -1.84
GDF1P27539 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.57□□□□□ -1.84
GDF1P27539 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GDF1P27539 RNU6-213P-201ENST00000384051 104 ntBASIC3.57□□□□□ -1.84
GDF1P27539 SNORD65C-201ENST00000390962 71 ntBASIC3.57□□□□□ -1.84
GDF1P27539 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
GDF1P27539 AL590704.1-201ENST00000402856 794 ntBASIC3.57□□□□□ -1.84
GDF1P27539 RN7SKP159-201ENST00000410657 292 ntBASIC3.57□□□□□ -1.84
GDF1P27539 RN7SKP27-201ENST00000410684 333 ntBASIC3.57□□□□□ -1.84
GDF1P27539 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.57□□□□□ -1.84
GDF1P27539 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.57□□□□□ -1.84
GDF1P27539 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.57□□□□□ -1.84
GDF1P27539 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.57□□□□□ -1.84
GDF1P27539 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.57□□□□□ -1.84
GDF1P27539 FABP5P3-201ENST00000437960 408 ntBASIC3.57□□□□□ -1.84
GDF1P27539 HSFY3P-201ENST00000444242 1191 ntBASIC3.57□□□□□ -1.84
GDF1P27539 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 AC239367.2-201ENST00000447309 705 ntBASIC3.57□□□□□ -1.84
GDF1P27539 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.57□□□□□ -1.84
GDF1P27539 AC008280.2-201ENST00000455473 307 ntBASIC3.57□□□□□ -1.84
GDF1P27539 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.57□□□□□ -1.84
GDF1P27539 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.57□□□□□ -1.84
GDF1P27539 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.57□□□□□ -1.84
GDF1P27539 RN7SL323P-201ENST00000494712 295 ntBASIC3.57□□□□□ -1.84
GDF1P27539 PRELID3BP6-201ENST00000503839 571 ntBASIC3.57□□□□□ -1.84
GDF1P27539 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.57□□□□□ -1.84
GDF1P27539 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.57□□□□□ -1.84
GDF1P27539 MTCO1P49-201ENST00000523429 802 ntBASIC3.57□□□□□ -1.84
GDF1P27539 AC083923.1-201ENST00000523708 376 ntBASIC3.57□□□□□ -1.84
GDF1P27539 OR4A12P-201ENST00000530847 918 ntBASIC3.57□□□□□ -1.84
GDF1P27539 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
GDF1P27539 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.57□□□□□ -1.84
GDF1P27539 AL606834.3-201ENST00000602615 496 ntBASIC3.57□□□□□ -1.84
GDF1P27539 AC069431.2-201ENST00000604149 1099 ntBASIC3.57□□□□□ -1.84
GDF1P27539 AP002802.2-201ENST00000605877 235 ntBASIC3.57□□□□□ -1.84
GDF1P27539 AL121652.1-201ENST00000608851 448 ntBASIC3.57□□□□□ -1.84
GDF1P27539 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.57□□□□□ -1.84
GDF1P27539 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
GDF1P27539 AC099654.9-201ENST00000637055 678 ntBASIC3.57□□□□□ -1.84
GDF1P27539 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.57□□□□□ -1.84
GDF1P27539 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.57□□□□□ -1.84
GDF1P27539 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GDF1P27539 RNF6P1-201ENST00000444889 1784 ntBASIC3.56□□□□□ -1.84
GDF1P27539 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GDF1P27539 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GDF1P27539 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GDF1P27539 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.56□□□□□ -1.84
GDF1P27539 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GDF1P27539 ENSAP3-201ENST00000312710 333 ntBASIC3.56□□□□□ -1.84
GDF1P27539 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.56□□□□□ -1.84
GDF1P27539 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.56□□□□□ -1.84
GDF1P27539 RPL32P23-201ENST00000397237 405 ntBASIC3.56□□□□□ -1.84
GDF1P27539 RNU6ATAC-201ENST00000408749 126 ntBASIC3.56□□□□□ -1.84
GDF1P27539 MTND4P11-201ENST00000417020 1058 ntBASIC3.56□□□□□ -1.84
GDF1P27539 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 PTP4A1P7-201ENST00000423476 514 ntBASIC3.56□□□□□ -1.84
GDF1P27539 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 RPL7P28-201ENST00000437739 740 ntBASIC3.56□□□□□ -1.84
GDF1P27539 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GDF1P27539 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 AL645638.1-201ENST00000440519 361 ntBASIC3.56□□□□□ -1.84
GDF1P27539 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 AL035407.2-201ENST00000454090 378 ntBASIC3.56□□□□□ -1.84
GDF1P27539 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.56□□□□□ -1.84
GDF1P27539 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.56□□□□□ -1.84
GDF1P27539 AC025554.1-201ENST00000505641 188 ntBASIC3.56□□□□□ -1.84
GDF1P27539 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.56□□□□□ -1.84
GDF1P27539 AC118942.1-201ENST00000529674 1035 ntBASIC3.56□□□□□ -1.84
GDF1P27539 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.56□□□□□ -1.84
GDF1P27539 CYCSP30-201ENST00000546447 172 ntBASIC3.56□□□□□ -1.84
GDF1P27539 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.56□□□□□ -1.84
GDF1P27539 AC010735.1-201ENST00000567305 1026 ntBASIC3.56□□□□□ -1.84
GDF1P27539 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.56□□□□□ -1.84
GDF1P27539 AC007599.1-201ENST00000568688 1174 ntBASIC3.56□□□□□ -1.84
GDF1P27539 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.56□□□□□ -1.84
GDF1P27539 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
GDF1P27539 AL713922.2-201ENST00000619384 716 ntBASIC3.56□□□□□ -1.84
GDF1P27539 AC022960.3-201ENST00000619794 441 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms