Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 AC104687.2-201ENST00000604442 342 ntBASIC4.84□□□□□ -1.63
CD40P25942 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40P25942 AC025574.2-201ENST00000615621 514 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC090527.3-201ENST00000619041 548 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC012150.2-201ENST00000621300 544 ntBASIC4.84□□□□□ -1.63
CD40P25942 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD40P25942 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD40P25942 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CD40P25942 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 ZNF734P-201ENST00000419494 1534 ntBASIC4.83□□□□□ -1.64
CD40P25942 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 RNU6-1085P-201ENST00000363576 107 ntBASIC4.83□□□□□ -1.64
CD40P25942 RNA5SP234-201ENST00000363916 119 ntBASIC4.83□□□□□ -1.64
CD40P25942 U3.20-201ENST00000390909 217 ntBASIC4.83□□□□□ -1.64
CD40P25942 U3.29-201ENST00000391296 212 ntBASIC4.83□□□□□ -1.64
CD40P25942 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 AL009179.1-201ENST00000406085 265 ntBASIC4.83□□□□□ -1.64
CD40P25942 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40P25942 RNF10P1-201ENST00000418589 369 ntBASIC4.83□□□□□ -1.64
CD40P25942 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 AL109913.1-201ENST00000421173 514 ntBASIC4.83□□□□□ -1.64
CD40P25942 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 RPL12P17-201ENST00000432393 498 ntBASIC4.83□□□□□ -1.64
CD40P25942 TMEM183AP1-205ENST00000432739 290 ntBASIC4.83□□□□□ -1.64
CD40P25942 CFL1P1-202ENST00000432948 411 ntBASIC4.83□□□□□ -1.64
CD40P25942 AC119618.1-201ENST00000434191 222 ntBASIC4.83□□□□□ -1.64
CD40P25942 OR6D1P-201ENST00000436165 939 ntBASIC4.83□□□□□ -1.64
CD40P25942 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 AC108734.1-201ENST00000439549 399 ntBASIC4.83□□□□□ -1.64
CD40P25942 HMGB3P21-201ENST00000452483 547 ntBASIC4.83□□□□□ -1.64
CD40P25942 AC104308.1-201ENST00000454621 333 ntBASIC4.83□□□□□ -1.64
CD40P25942 RPL12P39-201ENST00000455456 496 ntBASIC4.83□□□□□ -1.64
CD40P25942 RPL35P6-201ENST00000490024 372 ntBASIC4.83□□□□□ -1.64
CD40P25942 AC069439.1-201ENST00000494739 167 ntBASIC4.83□□□□□ -1.64
CD40P25942 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40P25942 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 AP003080.1-202ENST00000526526 915 ntBASIC4.83□□□□□ -1.64
CD40P25942 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 OR5BC1P-201ENST00000529327 739 ntBASIC4.83□□□□□ -1.64
CD40P25942 AC109635.3-201ENST00000529536 185 ntBASIC4.83□□□□□ -1.64
CD40P25942 AL512360.1-201ENST00000555346 234 ntBASIC4.83□□□□□ -1.64
CD40P25942 SUB1P2-201ENST00000556401 297 ntBASIC4.83□□□□□ -1.64
CD40P25942 H3F3BP2-201ENST00000583907 357 ntBASIC4.83□□□□□ -1.64
CD40P25942 MIR4420-201ENST00000583944 77 ntBASIC4.83□□□□□ -1.64
CD40P25942 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40P25942 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 AC004853.1-201ENST00000604902 698 ntBASIC4.83□□□□□ -1.64
CD40P25942 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 AC139792.3-201ENST00000623525 224 ntBASIC4.83□□□□□ -1.64
CD40P25942 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40P25942 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.83□□□□□ -1.64
CD40P25942 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CD40P25942 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 AC087516.1-201ENST00000561236 2428 ntBASIC4.83□□□□□ -1.64
CD40P25942 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40P25942 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40P25942 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 AC017104.4-201ENST00000636283 1592 ntBASIC4.82□□□□□ -1.64
CD40P25942 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 ZNF652P1-201ENST00000442420 1309 ntBASIC4.82□□□□□ -1.64
CD40P25942 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CD40P25942 RNU4-1-201ENST00000363925 141 ntBASIC4.82□□□□□ -1.64
CD40P25942 RNY4P16-201ENST00000364768 94 ntBASIC4.82□□□□□ -1.64
CD40P25942 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 RNU1-136P-201ENST00000384181 164 ntBASIC4.82□□□□□ -1.64
CD40P25942 Y_RNA.548-201ENST00000384656 105 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC009804.1-201ENST00000400949 179 ntBASIC4.82□□□□□ -1.64
CD40P25942 RN7SKP279-201ENST00000411383 298 ntBASIC4.82□□□□□ -1.64
CD40P25942 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms