Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VAMP1P23763 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VAMP1P23763 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 AC067945.1-201ENST00000342609 618 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 Y_RNA.86-201ENST00000363020 111 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 RNU6-1029P-201ENST00000384109 107 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AC005522.1-201ENST00000395416 346 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AL133388.1-201ENST00000404509 287 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AL606923.1-201ENST00000406616 190 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 U3.43-201ENST00000410734 213 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 CYP4F30P-202ENST00000420048 405 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AC007562.1-201ENST00000421819 517 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC023274.2-201ENST00000445264 521 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 BX842559.2-201ENST00000451418 605 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 RPL23AP31-201ENST00000456160 467 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 snoU13.4-201ENST00000458916 104 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AC008026.1-201ENST00000460492 447 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 EIF4EP3-201ENST00000498782 656 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC091849.1-201ENST00000509920 121 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AC016559.1-201ENST00000511420 199 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.37□□□□□ -1.55
VAMP1P23763 SCARNA18.2-201ENST00000516882 84 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 SNRPCP6-201ENST00000528310 210 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 RANP3-201ENST00000530970 276 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 MIR4786-201ENST00000583954 80 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.37□□□□□ -1.55
VAMP1P23763 AP002360.3-201ENST00000607673 710 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.37□□□□□ -1.55
VAMP1P23763 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 AC093913.1-201ENST00000614178 329 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AC116165.3-201ENST00000614524 400 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 uc_338.31-201ENST00000615595 186 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 AP005264.7-201ENST00000625003 745 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 GOT2P1-201ENST00000440922 1309 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.37□□□□□ -1.55
VAMP1P23763 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 AC108467.2-201ENST00000617640 1597 ntBASIC5.37□□□□□ -1.55
VAMP1P23763 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VAMP1P23763 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
VAMP1P23763 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP1P23763 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP1P23763 PCAT14-202ENST00000627127 3935 ntBASIC5.36□□□□□ -1.55
VAMP1P23763 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.36□□□□□ -1.55
VAMP1P23763 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VAMP1P23763 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VAMP1P23763 U3.14-201ENST00000365363 227 ntBASIC5.36□□□□□ -1.55
VAMP1P23763 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VAMP1P23763 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.36□□□□□ -1.55
VAMP1P23763 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms