Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USF1P22415 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.3□□□□□ -1.88
USF1P22415 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
USF1P22415 ZNF285B-201ENST00000561698 1767 ntBASIC3.3□□□□□ -1.88
USF1P22415 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.3□□□□□ -1.88
USF1P22415 FAM35DP-201ENST00000323387 2712 ntBASIC3.29□□□□□ -1.88
USF1P22415 NMD3P1-201ENST00000439704 1488 ntBASIC3.29□□□□□ -1.88
USF1P22415 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
USF1P22415 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
USF1P22415 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
USF1P22415 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.29□□□□□ -1.88
USF1P22415 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.29□□□□□ -1.88
USF1P22415 AL139247.1-201ENST00000422768 325 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC092832.1-201ENST00000422934 400 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC017083.1-201ENST00000428093 483 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC096638.2-201ENST00000434965 711 ntBASIC3.29□□□□□ -1.88
USF1P22415 RPL23AP83-201ENST00000434984 473 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.29□□□□□ -1.88
USF1P22415 PDSS1P2-201ENST00000449397 678 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.29□□□□□ -1.88
USF1P22415 RPL37P6-202ENST00000464216 403 ntBASIC3.29□□□□□ -1.88
USF1P22415 CABYRP1-201ENST00000465493 1045 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC069499.1-201ENST00000489433 509 ntBASIC3.29□□□□□ -1.88
USF1P22415 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.29□□□□□ -1.88
USF1P22415 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.29□□□□□ -1.88
USF1P22415 AL035404.1-201ENST00000497982 568 ntBASIC3.29□□□□□ -1.88
USF1P22415 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.29□□□□□ -1.88
USF1P22415 RNU1-95P-201ENST00000516357 160 ntBASIC3.29□□□□□ -1.88
USF1P22415 RNU1-128P-201ENST00000516704 160 ntBASIC3.29□□□□□ -1.88
USF1P22415 RN7SKP234-201ENST00000517173 224 ntBASIC3.29□□□□□ -1.88
USF1P22415 NARSP2-201ENST00000518524 679 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC026403.1-201ENST00000518938 295 ntBASIC3.29□□□□□ -1.88
USF1P22415 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.29□□□□□ -1.88
USF1P22415 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.29□□□□□ -1.88
USF1P22415 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.29□□□□□ -1.88
USF1P22415 GNRHR2P1-201ENST00000555315 631 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC007599.1-201ENST00000568688 1174 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC079171.1-201ENST00000568788 914 ntBASIC3.29□□□□□ -1.88
USF1P22415 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.29□□□□□ -1.88
USF1P22415 NTAN1P1-201ENST00000603150 646 ntBASIC3.29□□□□□ -1.88
USF1P22415 AP003392.5-201ENST00000607857 415 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC103710.3-201ENST00000608157 948 ntBASIC3.29□□□□□ -1.88
USF1P22415 AP000255.1-201ENST00000610276 676 ntBASIC3.29□□□□□ -1.88
USF1P22415 AC012314.7-201ENST00000619693 93 ntBASIC3.29□□□□□ -1.88
USF1P22415 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.29□□□□□ -1.88
USF1P22415 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.29□□□□□ -1.88
USF1P22415 AF001550.2-201ENST00000636643 217 ntBASIC3.29□□□□□ -1.88
USF1P22415 AL773545.4-201ENST00000637262 310 ntBASIC3.29□□□□□ -1.88
USF1P22415 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
USF1P22415 AL513478.4-201ENST00000641636 310 ntBASIC3.29□□□□□ -1.88
USF1P22415 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.29□□□□□ -1.88
USF1P22415 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
USF1P22415 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF1P22415 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF1P22415 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
USF1P22415 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.29□□□□□ -1.88
USF1P22415 LINC00561-201ENST00000565815 2738 ntBASIC3.28□□□□□ -1.88
USF1P22415 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
USF1P22415 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USF1P22415 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.28□□□□□ -1.88
USF1P22415 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
USF1P22415 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USF1P22415 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USF1P22415 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
USF1P22415 SNORA5A-201ENST00000384111 134 ntBASIC3.28□□□□□ -1.88
USF1P22415 RPL7AP73-201ENST00000413490 353 ntBASIC3.28□□□□□ -1.88
USF1P22415 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.28□□□□□ -1.88
USF1P22415 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 RPS7P5-201ENST00000441482 581 ntBASIC3.28□□□□□ -1.88
USF1P22415 VN1R25P-201ENST00000443385 738 ntBASIC3.28□□□□□ -1.88
USF1P22415 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 PPIAP3-201ENST00000450588 505 ntBASIC3.28□□□□□ -1.88
USF1P22415 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.28□□□□□ -1.88
USF1P22415 VN1R40P-201ENST00000455196 941 ntBASIC3.28□□□□□ -1.88
USF1P22415 HMGN2P7-201ENST00000456186 273 ntBASIC3.28□□□□□ -1.88
USF1P22415 RPL23AP62-201ENST00000463396 453 ntBASIC3.28□□□□□ -1.88
USF1P22415 AC104689.1-201ENST00000473356 768 ntBASIC3.28□□□□□ -1.88
USF1P22415 TRBV8-2-201ENST00000475637 270 ntBASIC3.28□□□□□ -1.88
USF1P22415 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.28□□□□□ -1.88
USF1P22415 AC006499.5-201ENST00000505037 514 ntBASIC3.28□□□□□ -1.88
USF1P22415 AC109458.1-201ENST00000508858 316 ntBASIC3.28□□□□□ -1.88
USF1P22415 AC008494.2-201ENST00000514544 370 ntBASIC3.28□□□□□ -1.88
USF1P22415 Vault.1-201ENST00000516474 102 ntBASIC3.28□□□□□ -1.88
USF1P22415 RN7SKP283-201ENST00000517197 270 ntBASIC3.28□□□□□ -1.88
USF1P22415 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 OR5AK3P-201ENST00000527486 1297 ntBASIC3.28□□□□□ -1.88
USF1P22415 AC074029.1-201ENST00000552531 1044 ntBASIC3.28□□□□□ -1.88
USF1P22415 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.28□□□□□ -1.88
USF1P22415 RNA5SP108-201ENST00000605921 117 ntBASIC3.28□□□□□ -1.88
USF1P22415 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.28□□□□□ -1.88
USF1P22415 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.28□□□□□ -1.88
USF1P22415 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.28□□□□□ -1.88
USF1P22415 AC009093.8-201ENST00000641769 292 ntBASIC3.28□□□□□ -1.88
USF1P22415 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USF1P22415 MAPK10-372ENST00000641954 3413 ntBASIC3.28□□□□□ -1.88
USF1P22415 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms