Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-236P-201ENST00000363886 106 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 MIR93-201ENST00000385024 80 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AL356967.1-201ENST00000406305 431 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 RAC1P3-201ENST00000416129 580 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 PTP4A1P7-201ENST00000423476 514 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AC234064.1-201ENST00000436312 247 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 YWHAZP8-201ENST00000436935 731 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFRAP16234 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFRAP16234 MTND2P39-201ENST00000457230 764 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 RPL37P6-202ENST00000464216 403 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFRAP16234 AC087385.1-201ENST00000475062 312 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AC025445.1-201ENST00000502728 300 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AC008427.1-201ENST00000503102 655 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AC091860.1-201ENST00000505723 432 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFRAP16234 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFRAP16234 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFRAP16234 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFRAP16234 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 AL136370.1-201ENST00000608166 691 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 VN1R74P-201ENST00000613259 503 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.25□□□□□ -1.73
PDGFRAP16234 RNA5SP196-201ENST00000625967 102 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AL773545.4-201ENST00000637262 310 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 FAM157B-203ENST00000639350 358 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 AL513478.4-201ENST00000641636 310 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PDGFRAP16234 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PDGFRAP16234 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 AL627171.1-201ENST00000618845 1308 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 MIR372-201ENST00000362225 67 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 RNU6-619P-201ENST00000365146 108 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 ENSAP1-201ENST00000392855 326 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 DSTNP4-201ENST00000399472 474 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 RN7SKP263-201ENST00000411194 309 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 CYP4F29P-201ENST00000420685 446 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 UBE2V1P1-201ENST00000430836 445 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AL356276.2-201ENST00000435919 558 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFRAP16234 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFRAP16234 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 RN7SL271P-201ENST00000487601 295 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 AC069306.1-201ENST00000507006 843 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFRAP16234 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFRAP16234 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.24□□□□□ -1.73
PDGFRAP16234 AL020997.3-201ENST00000602843 359 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 RPAP2P1-201ENST00000603626 1168 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AC002487.1-201ENST00000604565 994 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 RNU4-89P-201ENST00000607443 133 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AC112503.1-201ENST00000608436 391 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AC105429.2-201ENST00000610567 517 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.24□□□□□ -1.73
PDGFRAP16234 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PDGFRAP16234 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
PDGFRAP16234 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDGFRAP16234 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms