Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 TMEM251P1-201ENST00000503717 318 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 AC010587.1-201ENST00000505809 469 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 RNU6-201P-201ENST00000517100 61 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD8P13378 SCOCP1-201ENST00000554676 349 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 AC007342.5-201ENST00000571340 2142 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 MIR4742-201ENST00000581069 85 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD8P13378 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD8P13378 AC037198.3-201ENST00000616754 526 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 AL354950.2-201ENST00000617939 290 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD8P13378 AL078596.1-201ENST00000624856 447 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD8P13378 AC114546.3-201ENST00000623582 1734 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD8P13378 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD8P13378 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXD8P13378 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD8P13378 AC005225.5-201ENST00000623547 2225 ntBASIC6.21□□□□□ -1.42
HOXD8P13378 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD8P13378 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD8P13378 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
HOXD8P13378 AC068769.1-201ENST00000474767 2426 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 RIOK3P1-201ENST00000418778 1528 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 MTND4P35-201ENST00000604257 1375 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 AC010329.1-201ENST00000593903 8328 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 CASC19-284ENST00000642142 1868 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 NUP58P1-201ENST00000502546 1738 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD8P13378 MIR369-201ENST00000362155 70 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 MIR133B-201ENST00000362210 119 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 RNU6-984P-201ENST00000363236 109 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 RNU6-730P-201ENST00000383954 104 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 RNU1-77P-201ENST00000390868 162 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 RNU6-952P-201ENST00000391164 108 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXD8P13378 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 AC022022.1-201ENST00000430304 178 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 CYCSP6-201ENST00000434498 302 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 RPS26P40-201ENST00000435209 294 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD8P13378 FAM103A2P-201ENST00000444122 354 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 AC105399.1-202ENST00000447303 205 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AC104651.2-201ENST00000447549 528 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 MEMO1P4-201ENST00000453590 386 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 EIF4EP3-201ENST00000498782 656 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AC112206.3-201ENST00000514578 389 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 RNU4-49P-201ENST00000516080 140 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXD8P13378 HAUS8P1-201ENST00000549005 542 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD8P13378 HMGB1P6-201ENST00000569046 646 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXD8P13378 VN1R84P-201ENST00000593697 235 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXD8P13378 AL513327.3-201ENST00000602618 469 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 uc_338.9-201ENST00000617424 182 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXD8P13378 OR4G1P-203ENST00000641984 1631 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 AC005725.1-201ENST00000577346 2607 ntBASIC6.2□□□□□ -1.42
HOXD8P13378 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD8P13378 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD8P13378 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXD8P13378 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD8P13378 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXD8P13378 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD8P13378 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD8P13378 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD8P13378 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXD8P13378 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXD8P13378 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms