Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AP000567.1-201ENST00000406413 156 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 RNA5SP498-201ENST00000411342 120 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 RPL32P35-201ENST00000415214 394 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL1P09341 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 AL031736.2-201ENST00000426573 787 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AL591419.1-201ENST00000427423 339 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.63□□□□□ -1.99
CXCL1P09341 NPM1P49-201ENST00000448027 714 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AL157884.3-201ENST00000448273 1184 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 NUTF2P3-201ENST00000448540 384 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.63□□□□□ -1.99
CXCL1P09341 RPL36AP33-201ENST00000450395 310 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 TPMTP4-201ENST00000450749 678 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.63□□□□□ -1.99
CXCL1P09341 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.63□□□□□ -1.99
CXCL1P09341 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.63□□□□□ -1.99
CXCL1P09341 AC007686.1-201ENST00000488511 463 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 SOD1P3-201ENST00000518682 454 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 RANP9-201ENST00000519957 271 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.63□□□□□ -1.99
CXCL1P09341 MTCO1P49-201ENST00000523429 802 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.63□□□□□ -1.99
CXCL1P09341 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.63□□□□□ -1.99
CXCL1P09341 AC120057.2-201ENST00000571520 271 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.63□□□□□ -1.99
CXCL1P09341 AC024940.4-201ENST00000605507 246 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AL627309.6-201ENST00000606857 840 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AC005344.1-201ENST00000613391 459 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 AC112484.5-201ENST00000624189 228 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CXCL1P09341 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 AL355578.1-201ENST00000607405 1328 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.63□□□□□ -1.99
CXCL1P09341 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CXCL1P09341 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 RNU6-356P-201ENST00000384140 107 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 RNA5SP44-201ENST00000410446 133 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 RPL31P2-201ENST00000413849 377 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 OR2AS1P-201ENST00000427827 319 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 ETF1P3-201ENST00000430422 1160 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 RPS27P5-201ENST00000444247 244 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 UQCRHP3-201ENST00000451503 251 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.62□□□□□ -1.99
CXCL1P09341 RPL31P13-201ENST00000484151 370 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 RPS4XP15-201ENST00000489210 795 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 AC005726.1-201ENST00000494679 427 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL1P09341 RN7SKP234-201ENST00000517173 224 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.62□□□□□ -1.99
CXCL1P09341 MED28P5-201ENST00000528254 438 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 AC007536.1-201ENST00000533382 349 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL1P09341 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL1P09341 AC055876.1-202ENST00000567053 138 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 MIR4284-201ENST00000578924 81 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 ARF4P1-201ENST00000605447 541 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 RNU1-30P-201ENST00000606575 163 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 AL021707.7-201ENST00000607991 416 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 MIR6867-201ENST00000610636 67 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 PLCE1P1-201ENST00000622094 305 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CXCL1P09341 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.62□□□□□ -1.99
CXCL1P09341 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CXCL1P09341 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 CCT8P1-201ENST00000413611 1657 ntBASIC2.62□□□□□ -1.99
CXCL1P09341 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.62□□□□□ -1.99
CXCL1P09341 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL1P09341 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.62□□□□□ -1.99
CXCL1P09341 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL1P09341 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL1P09341 MTND5P3-201ENST00000438536 1800 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL1P09341 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.61□□□□□ -1.99
CXCL1P09341 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL1P09341 FAM91A3P-201ENST00000456826 2544 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL1P09341 RN7SKP280-201ENST00000364196 304 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 SNORA58B-201ENST00000364259 136 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 MIR591-201ENST00000385290 95 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AL031121.1-201ENST00000406553 254 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AC245054.2-201ENST00000415639 319 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL1P09341 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
CXCL1P09341 AC008065.1-201ENST00000428525 348 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms