Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 CBX3P3-201ENST00000508108 532 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 MTCO1P35-201ENST00000515270 228 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 MTND4LP26-201ENST00000518144 282 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 HMGB1P23-201ENST00000518743 568 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 MTND1P15-201ENST00000579262 949 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC103881.1-201ENST00000603476 538 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC025588.4-201ENST00000615802 908 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RNU6-368P-201ENST00000620928 107 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC008443.7-201ENST00000622195 246 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 RNU6-538P-201ENST00000622329 107 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 AC145207.9-201ENST00000623802 325 ntBASIC5.23□□□□□ -1.57
HLA-DOAP06340 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DOAP06340 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DOAP06340 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC091046.3-201ENST00000631455 1574 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC100871.1-201ENST00000507871 1456 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 MIR383-201ENST00000362257 73 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 RNU4-21P-201ENST00000362802 126 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 RNA5SP479-201ENST00000364858 117 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 RN7SKP186-201ENST00000365371 303 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AL663109.1-201ENST00000411498 844 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 MTCO1P3-201ENST00000429327 192 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 RPS27AP12-201ENST00000429552 465 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AL132765.1-201ENST00000434165 553 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 HMGB1P16-201ENST00000447155 540 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC009963.2-201ENST00000453431 138 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 RNU6-956P-201ENST00000458868 103 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 RPL7P19-201ENST00000469948 618 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC073522.1-201ENST00000483312 377 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC108475.1-201ENST00000507880 950 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 RNU6-416P-201ENST00000516265 103 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AP003730.1-201ENST00000524605 285 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC124293.1-201ENST00000530034 493 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 OR4C2P-201ENST00000530855 1064 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 BNIP3P26-201ENST00000600827 554 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AL020997.2-201ENST00000602607 184 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC239868.4-201ENST00000608318 671 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC099676.1-201ENST00000608886 657 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 MIR8069-1-201ENST00000616627 86 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 MIR8069-2-201ENST00000621412 86 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC091905.2-201ENST00000623143 306 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC068137.3-201ENST00000639191 341 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 AC073869.6-201ENST00000640656 341 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DOAP06340 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 VPS35P1-201ENST00000563400 1518 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.22□□□□□ -1.57
HLA-DOAP06340 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HLA-DOAP06340 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DOAP06340 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DOAP06340 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DOAP06340 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DOAP06340 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOAP06340 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOAP06340 RNU1-132P-201ENST00000364300 164 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 RNU1-63P-201ENST00000383902 164 ntBASIC5.21□□□□□ -1.58
HLA-DOAP06340 MIR921-201ENST00000401133 56 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms