Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU2-27P-201ENST00000516185 142 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 OR5AK3P-201ENST00000527486 1297 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 CBX3P5-201ENST00000552017 521 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 TRAV15-201ENST00000556680 249 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC022916.3-201ENST00000592961 742 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 VN1R84P-201ENST00000593697 235 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC018618.2-201ENST00000604770 446 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 U1.1-201ENST00000384101 164 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 HMGB3P18-201ENST00000406327 590 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 MIR1303-201ENST00000408625 86 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 VTA1P1-201ENST00000414044 866 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AL158825.1-201ENST00000414735 521 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 MTND2P15-201ENST00000418575 892 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 RPL30P3-201ENST00000424262 333 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 SETD6P1-201ENST00000444575 317 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 RN7SL132P-201ENST00000478131 296 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 MTND2P31-201ENST00000512602 616 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 NPM1P41-201ENST00000512920 831 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 RNU6-1102P-201ENST00000516149 96 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 SCARNA14-201ENST00000516903 136 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 IGHV3-32-201ENST00000519182 355 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 CYCSP30-201ENST00000546447 172 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 POLR2KP1-201ENST00000553226 168 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 LINC00557-201ENST00000563184 1279 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 MIR5685-201ENST00000579080 79 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 MIR4512-201ENST00000583257 77 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 NF1P5-201ENST00000588287 448 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 PCNAP1-202ENST00000595299 752 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC099669.2-201ENST00000616549 437 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC110801.1-201ENST00000623590 212 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 U6.107-201ENST00000637108 79 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC068647.1-201ENST00000489539 2265 ntBASIC3.24□□□□□ -1.89
HLA-DPB1P04440 AC100871.1-201ENST00000507871 1456 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 METTL21EP-201ENST00000298105 713 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 MIR30E-201ENST00000362104 92 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AP002088.1-201ENST00000382740 395 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 SNORA57.1-201ENST00000391227 145 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 SKINT1L-201ENST00000401057 817 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 FABP12P1-201ENST00000401911 322 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC009237.5-201ENST00000414271 501 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC073508.1-201ENST00000428866 656 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 RNFT1P2-201ENST00000443064 757 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 RPL7P31-201ENST00000450192 724 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 MTND2P30-201ENST00000456663 382 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 FTH1P24-201ENST00000503502 462 ntBASIC3.23□□□□□ -1.89
HLA-DPB1P04440 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DPB1P04440 AC111193.1-201ENST00000504097 155 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms