Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-311P-201ENST00000516224 102 ntBASIC4.25□□□□□ -1.73
LDLRP01130 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AC023632.1-201ENST00000518463 375 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.25□□□□□ -1.73
LDLRP01130 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.25□□□□□ -1.73
LDLRP01130 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 MIR5708-201ENST00000579723 85 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AC015726.1-201ENST00000602353 681 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AC068790.2-201ENST00000602601 557 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AC073091.2-201ENST00000603205 907 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AL158196.1-201ENST00000616786 434 ntBASIC4.25□□□□□ -1.73
LDLRP01130 OR8B1P-202ENST00000641132 1178 ntBASIC4.25□□□□□ -1.73
LDLRP01130 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LDLRP01130 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRP01130 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRP01130 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
LDLRP01130 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRP01130 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LDLRP01130 AL390862.1-201ENST00000635467 1469 ntBASIC4.24□□□□□ -1.73
LDLRP01130 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LDLRP01130 RAD17P1-201ENST00000418130 2042 ntBASIC4.24□□□□□ -1.73
LDLRP01130 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LDLRP01130 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 AL133243.3-201ENST00000617415 3004 ntBASIC4.24□□□□□ -1.73
LDLRP01130 RNU4-68P-201ENST00000364314 141 ntBASIC4.24□□□□□ -1.73
LDLRP01130 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRP01130 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.24□□□□□ -1.73
LDLRP01130 RNU6-575P-201ENST00000411326 105 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 MORF4L1P6-201ENST00000418771 268 ntBASIC4.24□□□□□ -1.73
LDLRP01130 RPS12P5-201ENST00000423449 371 ntBASIC4.24□□□□□ -1.73
LDLRP01130 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRP01130 NANOGP6-201ENST00000429190 847 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRP01130 PRELID3BP10-201ENST00000431957 584 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRP01130 MTND4P32-201ENST00000437189 1237 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRP01130 AC114755.5-201ENST00000447760 831 ntBASIC4.24□□□□□ -1.73
LDLRP01130 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 VN1R40P-201ENST00000455196 941 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRP01130 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 AC015724.1-201ENST00000478577 156 ntBASIC4.24□□□□□ -1.73
LDLRP01130 MTND4LP2-201ENST00000502312 285 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 PARP4P3-201ENST00000510265 317 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.24□□□□□ -1.73
LDLRP01130 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 OR5M7P-201ENST00000526140 972 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AP001781.1-201ENST00000530977 207 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRP01130 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.24□□□□□ -1.73
LDLRP01130 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 OSBPL9P5-201ENST00000542581 171 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRP01130 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 MTND3P13-201ENST00000574391 343 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.24□□□□□ -1.73
LDLRP01130 AC011477.5-201ENST00000586571 259 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRP01130 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRP01130 OR6R2P-201ENST00000609216 300 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AC231759.1-201ENST00000616455 597 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AL158163.2-201ENST00000619110 700 ntBASIC4.24□□□□□ -1.73
LDLRP01130 AL121895.2-201ENST00000619558 447 ntBASIC4.24□□□□□ -1.73
LDLRP01130 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
LDLRP01130 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 AC000367.1-201ENST00000452711 1766 ntBASIC4.24□□□□□ -1.73
LDLRP01130 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDLRP01130 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LDLRP01130 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRP01130 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRP01130 Y_RNA.318-201ENST00000365131 97 ntBASIC4.23□□□□□ -1.73
LDLRP01130 RNU6-1242P-201ENST00000391052 103 ntBASIC4.23□□□□□ -1.73
LDLRP01130 RNA5SP171-201ENST00000391071 115 ntBASIC4.23□□□□□ -1.73
LDLRP01130 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms