Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PPIAP31-201ENST00000405422 495 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 TCEA1P4-201ENST00000415066 844 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 CRYBB2P1-203ENST00000415709 538 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSSCA1O60232 RPL7P2-201ENST00000427639 268 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.6□□□□□ -1.99
SSSCA1O60232 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 CYCSP43-201ENST00000438233 310 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 TPT1P13-201ENST00000449760 499 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SSSCA1O60232 AC118282.1-201ENST00000506408 765 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSSCA1O60232 AC147055.1-201ENST00000509261 750 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 AC119751.1-201ENST00000513357 765 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 MIR2116-201ENST00000517221 80 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 OR4A2P-201ENST00000527276 913 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 AC107982.3-201ENST00000584957 985 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
SSSCA1O60232 MIR6820-201ENST00000611508 62 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 AL157817.1-201ENST00000614264 790 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 AL356490.1-201ENST00000623079 479 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.6□□□□□ -1.99
SSSCA1O60232 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSSCA1O60232 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.6□□□□□ -1.99
SSSCA1O60232 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSSCA1O60232 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.59□□□□□ -1.99
SSSCA1O60232 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
SSSCA1O60232 DYNLT3P1-201ENST00000378574 347 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 MIR585-201ENST00000384887 94 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 RN7SKP111-201ENST00000410349 271 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.59□□□□□ -1.99
SSSCA1O60232 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 RPS7P5-201ENST00000441482 581 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 PTGES3P5-201ENST00000455109 434 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.59□□□□□ -1.99
SSSCA1O60232 AC026979.1-201ENST00000492525 396 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 POU5F1P7-201ENST00000508759 541 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.59□□□□□ -1.99
SSSCA1O60232 SNORA70.17-201ENST00000516449 133 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.59□□□□□ -1.99
SSSCA1O60232 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.59□□□□□ -1.99
SSSCA1O60232 AC103843.2-201ENST00000530523 682 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSSCA1O60232 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.59□□□□□ -1.99
SSSCA1O60232 OR4H12P-201ENST00000556269 907 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.59□□□□□ -1.99
SSSCA1O60232 AC005951.1-201ENST00000576706 485 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 MTND2P13-201ENST00000577438 1039 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.59□□□□□ -1.99
SSSCA1O60232 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.59□□□□□ -1.99
SSSCA1O60232 AL162713.1-201ENST00000604480 262 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AL139041.1-201ENST00000605480 610 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AL354976.1-201ENST00000613843 387 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AC006338.2-201ENST00000616864 791 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 ZYXP1-201ENST00000617638 118 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AC016542.2-201ENST00000624201 619 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AC048347.1-201ENST00000624621 427 ntBASIC2.59□□□□□ -1.99
SSSCA1O60232 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SSSCA1O60232 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.59□□□□□ -1.99
SSSCA1O60232 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.59□□□□□ -2
SSSCA1O60232 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
SSSCA1O60232 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.59□□□□□ -2
SSSCA1O60232 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.59□□□□□ -2
SSSCA1O60232 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.59□□□□□ -2
SSSCA1O60232 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SSSCA1O60232 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -2
SSSCA1O60232 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 RPL23AP57-201ENST00000332361 466 ntBASIC2.58□□□□□ -2
SSSCA1O60232 RNU4-35P-201ENST00000362588 141 ntBASIC2.58□□□□□ -2
SSSCA1O60232 SNORD17-201ENST00000390930 237 ntBASIC2.58□□□□□ -2
SSSCA1O60232 HMGB1P10-201ENST00000395823 563 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AL049693.1-201ENST00000402760 611 ntBASIC2.58□□□□□ -2
SSSCA1O60232 HMGB1P13-201ENST00000406019 642 ntBASIC2.58□□□□□ -2
SSSCA1O60232 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.58□□□□□ -2
SSSCA1O60232 BRWD1P3-201ENST00000428816 390 ntBASIC2.58□□□□□ -2
SSSCA1O60232 CYCSP4-201ENST00000429682 331 ntBASIC2.58□□□□□ -2
SSSCA1O60232 RPL23AP69-201ENST00000431134 458 ntBASIC2.58□□□□□ -2
SSSCA1O60232 ATP5C1P1-201ENST00000441945 895 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSSCA1O60232 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.58□□□□□ -2
SSSCA1O60232 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.58□□□□□ -2
SSSCA1O60232 AC010683.1-201ENST00000473673 378 ntBASIC2.58□□□□□ -2
SSSCA1O60232 RPL7P38-201ENST00000488396 739 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC078817.1-201ENST00000492623 435 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC093663.1-201ENST00000497190 394 ntBASIC2.58□□□□□ -2
SSSCA1O60232 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
SSSCA1O60232 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms