Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.48□□□□□ -1.69
SMAD6O43541 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMAD6O43541 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SMAD6O43541 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
SMAD6O43541 RNU6-517P-201ENST00000384362 110 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SMAD6O43541 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.48□□□□□ -1.69
SMAD6O43541 RPL31P52-201ENST00000407532 367 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.48□□□□□ -1.69
SMAD6O43541 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.48□□□□□ -1.69
SMAD6O43541 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.48□□□□□ -1.69
SMAD6O43541 RAB28P1-201ENST00000411517 641 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 RPS20P14-201ENST00000412545 360 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.48□□□□□ -1.69
SMAD6O43541 MTCYBP5-201ENST00000423752 1135 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.48□□□□□ -1.69
SMAD6O43541 AC011998.1-201ENST00000433403 117 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC091390.1-201ENST00000433904 331 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AL353898.1-201ENST00000444055 238 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AL929288.2-201ENST00000446368 407 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.48□□□□□ -1.69
SMAD6O43541 AC069528.1-202ENST00000482888 637 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 LINC00888-204ENST00000487386 421 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.48□□□□□ -1.69
SMAD6O43541 HPRT1P2-201ENST00000505250 544 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.48□□□□□ -1.69
SMAD6O43541 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.48□□□□□ -1.69
SMAD6O43541 TRAV8-5-201ENST00000537369 341 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.48□□□□□ -1.69
SMAD6O43541 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.48□□□□□ -1.69
SMAD6O43541 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.48□□□□□ -1.69
SMAD6O43541 AC087465.1-201ENST00000560574 245 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.48□□□□□ -1.69
SMAD6O43541 MIR4512-201ENST00000583257 77 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 MIR3138-201ENST00000585238 82 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 RSL24D1P11-201ENST00000591045 491 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 HMGB2P1-201ENST00000591146 634 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 VN1R90P-201ENST00000595717 726 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 BMS1P7-201ENST00000602440 1052 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC079587.1-201ENST00000603846 277 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC010680.3-201ENST00000604215 520 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AL160290.3-201ENST00000604869 165 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC005962.2-201ENST00000611427 652 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMAD6O43541 AC099842.1-201ENST00000619919 596 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC140113.4-201ENST00000622087 222 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC092656.1-203ENST00000624134 423 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC007494.3-201ENST00000624660 743 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AP000843.1-201ENST00000624880 701 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 MIR6830-201ENST00000636015 70 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 PNPT1P2-201ENST00000456768 2050 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMAD6O43541 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMAD6O43541 AL118496.1-201ENST00000440201 1812 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 AC006042.3-201ENST00000454684 1469 ntBASIC4.48□□□□□ -1.69
SMAD6O43541 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMAD6O43541 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 DDX18P4-201ENST00000511690 1966 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SMAD6O43541 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.47□□□□□ -1.69
SMAD6O43541 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SMAD6O43541 RNU6-157P-201ENST00000383957 107 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 RNU6-413P-201ENST00000384115 107 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 SNORD96B-201ENST00000386148 79 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AL583835.1-201ENST00000399570 407 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AC136624.1-201ENST00000400791 413 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AL078604.1-201ENST00000404609 466 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 RPL26P37-201ENST00000411983 438 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 NRBF2P2-201ENST00000413087 861 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.47□□□□□ -1.69
SMAD6O43541 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.47□□□□□ -1.69
SMAD6O43541 AC006366.1-201ENST00000422002 759 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AC234779.1-201ENST00000425910 285 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 CDY14P-201ENST00000431260 1014 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 RPEP2-201ENST00000432149 701 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 RPS3AP54-201ENST00000435535 734 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AL031667.1-201ENST00000440222 725 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 TPT1P12-201ENST00000448968 492 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 CDY23P-201ENST00000451661 1014 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 SRRM1P2-201ENST00000464531 1192 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 RN7SL303P-201ENST00000469773 251 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 AC010198.2-201ENST00000550612 259 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.47□□□□□ -1.69
SMAD6O43541 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.47□□□□□ -1.69
SMAD6O43541 MIR3915-201ENST00000578518 97 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.47□□□□□ -1.69
SMAD6O43541 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms