Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL121772.2-201ENST00000614331 297 ntBASIC4.09□□□□□ -1.75
CLDN3O15551 STMN1P1-201ENST00000617809 440 ntBASIC4.09□□□□□ -1.75
CLDN3O15551 AC024595.1-201ENST00000623088 387 ntBASIC4.09□□□□□ -1.75
CLDN3O15551 AC004943.3-201ENST00000624116 600 ntBASIC4.09□□□□□ -1.75
CLDN3O15551 AL163152.1-201ENST00000642001 374 ntBASIC4.09□□□□□ -1.75
CLDN3O15551 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
CLDN3O15551 AC083899.2-201ENST00000423285 1376 ntBASIC4.09□□□□□ -1.75
CLDN3O15551 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN3O15551 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLDN3O15551 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.76
CLDN3O15551 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN3O15551 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CLDN3O15551 HMGN2P8-201ENST00000391458 268 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN3O15551 DNAJC19P6-201ENST00000401853 280 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN3O15551 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN3O15551 RAC1P3-201ENST00000416129 580 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.08□□□□□ -1.76
CLDN3O15551 AC092832.1-201ENST00000422934 400 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN3O15551 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN3O15551 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN3O15551 IFNNP1-201ENST00000429219 553 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AC018644.1-201ENST00000429934 551 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN3O15551 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 AC104689.1-201ENST00000473356 768 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 RPL21P103-201ENST00000479921 488 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 DCAF13P1-201ENST00000495256 1330 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN3O15551 UBE2CP3-201ENST00000502715 450 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN3O15551 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.08□□□□□ -1.76
CLDN3O15551 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.08□□□□□ -1.76
CLDN3O15551 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN3O15551 AC027104.1-201ENST00000563702 681 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.08□□□□□ -1.76
CLDN3O15551 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 KATNBL1P5-201ENST00000605015 517 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 CR392039.5-201ENST00000623201 510 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AL590396.2-201ENST00000636511 1041 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.08□□□□□ -1.76
CLDN3O15551 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLDN3O15551 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDN3O15551 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
CLDN3O15551 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLDN3O15551 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDN3O15551 AC027287.1-201ENST00000553115 1453 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.07□□□□□ -1.76
CLDN3O15551 AC104446.1-201ENST00000613728 1321 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDN3O15551 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDN3O15551 RNU6-543P-201ENST00000362576 108 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 SNORA62.3-201ENST00000365110 153 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLDN3O15551 RNU6-1293P-201ENST00000384077 107 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 SOD2P1-201ENST00000396543 562 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 ATF1P1-201ENST00000406040 927 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDN3O15551 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDN3O15551 RPS15AP40-201ENST00000419621 391 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AC092809.1-201ENST00000441469 474 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDN3O15551 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDN3O15551 AL133547.1-201ENST00000448546 220 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 SNORA84-201ENST00000459229 133 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDN3O15551 AC073522.1-201ENST00000483312 377 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AC004069.2-201ENST00000505438 1114 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 HMGN1P11-201ENST00000508668 303 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 FTH1P9-201ENST00000513251 355 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 PAICSP4-201ENST00000517543 1253 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDN3O15551 AC007991.1-201ENST00000522680 631 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 SNRPGP1-201ENST00000553864 222 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.07□□□□□ -1.76
CLDN3O15551 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDN3O15551 EIF1P6-201ENST00000600054 334 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AL163642.2-201ENST00000604722 1019 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AC005972.3-201ENST00000606304 481 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDN3O15551 RNU6-156P-201ENST00000621869 107 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AC039056.2-201ENST00000622261 511 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 AC006504.1-201ENST00000562493 3666 ntBASIC4.07□□□□□ -1.76
CLDN3O15551 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDN3O15551 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLDN3O15551 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
CLDN3O15551 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDN3O15551 ASNSP1-204ENST00000641977 1664 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLDN3O15551 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDN3O15551 NMD3P1-201ENST00000439704 1488 ntBASIC4.06□□□□□ -1.76
CLDN3O15551 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms