Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC090229.1-201ENST00000590983 1609 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 LARP1BP1-201ENST00000506036 1359 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC011978.2-201ENST00000569835 2054 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 SMG1P5-202ENST00000529428 4219 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 SMG1P2-201ENST00000566127 4221 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 CAP1P2-201ENST00000417455 1409 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 OR1S2-201ENST00000302592 978 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RNU5A-8P-201ENST00000364102 114 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RN7SKP78-201ENST00000364711 318 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RNU6-474P-201ENST00000384243 107 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RNU6-831P-201ENST00000384548 107 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MIR1266-201ENST00000408125 84 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AL096829.1-201ENST00000413677 457 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 GAPDHP37-201ENST00000442317 968 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC004129.2-201ENST00000457229 287 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RN7SL552P-201ENST00000462094 276 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AP001992.1-205ENST00000462248 379 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RN7SL197P-201ENST00000466981 299 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 RPL23AP11-201ENST00000475260 469 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MRPL57P6-201ENST00000506570 309 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 FAM206BP-201ENST00000510179 541 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 KHDC1P1-201ENST00000511053 508 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 FTH1P21-201ENST00000512179 511 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC093853.1-201ENST00000515689 483 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 SNORA25.17-201ENST00000517184 124 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MRPS16P1-201ENST00000523462 412 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MTCYBP13-201ENST00000578634 1093 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AP001330.4-201ENST00000604350 154 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC004908.2-201ENST00000609090 574 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AL589743.6-201ENST00000611025 117 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC040896.1-201ENST00000613819 479 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC010205.1-201ENST00000616668 449 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MIR6133-201ENST00000617057 108 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AC244100.1-202ENST00000621554 382 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 MAPK10-328ENST00000641553 4009 ntBASIC5.17□□□□□ -1.58
SHISA3A0PJX4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHISA3A0PJX4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.16□□□□□ -1.58
SHISA3A0PJX4 SNORA33.2-201ENST00000365413 134 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RNY3P13-201ENST00000365542 102 ntBASIC5.16□□□□□ -1.58
SHISA3A0PJX4 RNU4-20P-201ENST00000365601 151 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms