Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 AC006116.7-201ENST00000590141 756 ntBASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 AC012493.2-201ENST00000595083 291 ntBASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 AL773545.4-201ENST00000637262 310 ntBASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 AL513478.4-201ENST00000641636 310 ntBASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHROOM4Q9ULL8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 RNA5SP51-201ENST00000364750 119 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 SNORA3.3-201ENST00000408712 125 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 BX510359.1-201ENST00000456973 237 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 HMGN1P11-201ENST00000508668 303 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 RN7SKP289-201ENST00000517244 295 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC022695.1-201ENST00000522089 237 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC068993.1-201ENST00000546724 589 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 EIF1P6-201ENST00000600054 334 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC124312.6-202ENST00000623624 418 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 BTBD10P1-201ENST00000549824 1352 ntBASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SHROOM4Q9ULL8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 RPL7P60-201ENST00000397636 735 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 HIGD1AP4-201ENST00000430194 280 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AL591503.2-201ENST00000442314 1005 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AC008481.1-201ENST00000463278 396 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 UBE2DNL-203ENST00000474922 222 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AL390334.1-201ENST00000556395 450 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AP005205.1-201ENST00000563503 508 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 PCNAP1-202ENST00000595299 752 ntBASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.32□□□□□ -1.24
SHROOM4Q9ULL8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 AC069282.1-201ENST00000411911 526 ntBASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 MTND2P15-201ENST00000418575 892 ntBASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 AC026368.1-201ENST00000614934 690 ntBASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 AC079684.1-201ENST00000621405 437 ntBASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 AP003400.6-201ENST00000624698 740 ntBASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC7.31□□□□□ -1.24
SHROOM4Q9ULL8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 RNU6-1339P-201ENST00000363574 91 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 Y_RNA.510-201ENST00000384511 114 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AL355615.1-201ENST00000406187 641 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 RPL31P52-201ENST00000407532 367 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 UBE2V1P9-201ENST00000414760 368 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC005326.1-201ENST00000429197 123 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 MTCO3P27-201ENST00000514397 196 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 OR5B10P-201ENST00000532869 642 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC007458.1-201ENST00000542812 373 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC104072.1-201ENST00000568817 668 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC090312.2-201ENST00000582687 378 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 SCARNA15.3-201ENST00000626315 122 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 SCARNA4.1-201ENST00000628597 123 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 AC097504.1-201ENST00000515103 2415 ntBASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM4Q9ULL8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms