Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 SNORA71B-202ENST00000439232 272 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 CBX1P4-201ENST00000439415 457 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AL353093.1-201ENST00000441292 436 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 TPMTP4-201ENST00000450749 678 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 ANP32BP2-201ENST00000454525 545 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 RNA5SP164-201ENST00000516533 110 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 HAUS1P3-201ENST00000523909 662 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AL133457.1-201ENST00000564251 987 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC099489.2-201ENST00000574976 260 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AL354760.1-201ENST00000608357 643 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC079684.1-201ENST00000621405 437 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC024023.1-201ENST00000624530 922 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AP001002.2-201ENST00000625137 386 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 ZNF90P1-201ENST00000480493 1951 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 SNORA71.3-201ENST00000362582 128 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 RPL7P60-201ENST00000397636 735 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 MTND4LP7-201ENST00000431728 294 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 RPS26P40-201ENST00000435209 294 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 BTBD7P2-201ENST00000441962 620 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 RPL7P15-201ENST00000461190 712 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AC018635.1-201ENST00000468292 1030 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 RAC1P2-201ENST00000511164 579 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 GTF2IP22-201ENST00000554443 182 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 CKS1BP1-201ENST00000555221 240 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AC040174.2-201ENST00000602701 465 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 SNORA62.6-201ENST00000606322 83 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 RNU1-30P-201ENST00000606575 163 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AL034408.1-202ENST00000636088 415 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP2Q9UDT6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 MTND4P21-201ENST00000453886 1357 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 RNU1-87P-201ENST00000363727 170 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 RNU6-317P-201ENST00000384031 107 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC007066.1-201ENST00000392902 381 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 SOD2P1-201ENST00000396543 562 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 SYF2P2-201ENST00000417620 583 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 TCEA1P2-201ENST00000420496 906 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC069157.1-201ENST00000421749 137 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AL390879.2-203ENST00000426943 1121 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AL358232.1-201ENST00000448030 501 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AL500527.1-201ENST00000448532 255 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC034236.1-201ENST00000469891 373 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 HMGN1P11-201ENST00000508668 303 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC106785.3-201ENST00000564064 847 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AL034351.1-201ENST00000605288 668 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 SNORA51-201ENST00000606420 132 ntBASIC4.42□□□□□ -1.7
CLIP2Q9UDT6 AC092953.2-201ENST00000608000 699 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms