Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 BX842559.2-201ENST00000451418 605 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 RPL7AP10-201ENST00000481016 791 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC097173.1-201ENST00000505862 819 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 OR5BC1P-201ENST00000529327 739 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 RAB11AP2-201ENST00000545905 639 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC004217.3-201ENST00000551552 878 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC020910.2-201ENST00000603635 610 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC090578.1-201ENST00000604955 591 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL391358.1-201ENST00000605342 190 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL390208.1-201ENST00000605885 644 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AP004247.3-201ENST00000608682 624 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC131902.3-201ENST00000611767 581 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL359535.1-201ENST00000612100 1087 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC002553.4-201ENST00000616896 331 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AL034370.1-201ENST00000397254 1590 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 ABCC13-202ENST00000463099 3842 ntBASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.71□□□□□ -1.5
PDLIM7Q9NR12 AP000432.2-201ENST00000624164 2048 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RNU6-582P-201ENST00000362989 107 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 OR52E6-202ENST00000379946 954 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RNU6-876P-201ENST00000391295 104 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL031663.1-201ENST00000437445 219 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 DPPA3P1-201ENST00000448050 469 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 NPM1P39-201ENST00000449818 867 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL935212.3-201ENST00000450729 284 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 SNRPFP4-201ENST00000456366 242 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 snoU13.1-201ENST00000459157 104 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RN7SL244P-201ENST00000493405 297 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL035404.1-201ENST00000497982 568 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 HMGB1P28-201ENST00000507778 552 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 PTGES3P3-201ENST00000511479 482 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AF131216.2-201ENST00000512316 564 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RNA5SP43-201ENST00000516559 110 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC134698.5-201ENST00000519444 336 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 OR5M7P-201ENST00000526140 972 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL110118.1-201ENST00000553543 400 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 TRAV15-201ENST00000556680 249 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AC136618.2-201ENST00000575091 400 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL365503.1-201ENST00000605247 905 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RNU6-88P-201ENST00000606801 100 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL121757.2-201ENST00000611223 313 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 AL139089.1-201ENST00000620372 975 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 CRYM-AS1-204ENST00000637983 556 ntBASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms