Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC006480.1-201ENST00000449887 378 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 HMGB1P26-201ENST00000452520 628 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC011037.1-201ENST00000483964 558 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 RPS3AP6-201ENST00000484430 795 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC110792.1-201ENST00000491826 472 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 RNA5SP208-201ENST00000516156 78 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AP000926.4-201ENST00000527351 454 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 OR5D17P-201ENST00000531492 978 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 MIR548Y-201ENST00000582739 110 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 OR4H6P-202ENST00000603819 340 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AL021368.1-201ENST00000607490 540 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AL023583.1-201ENST00000607518 1143 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 MIR8058-201ENST00000615737 89 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC011472.4-201ENST00000615848 491 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC015726.3-201ENST00000624501 418 ntBASIC3.29□□□□□ -1.88
HMG20AQ9NP66 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.29□□□□□ -1.88
HMG20AQ9NP66 AC024560.2-201ENST00000507981 1497 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC004972.1-201ENST00000623934 2209 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 RLIMP1-201ENST00000339626 1680 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 RNA5SP42-201ENST00000364278 115 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 SNORA56-201ENST00000383966 129 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 RNU4-74P-201ENST00000411280 161 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 Z97055.1-201ENST00000419730 712 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC016712.1-201ENST00000431088 378 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 NDUFB1P1-201ENST00000435191 180 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 MTCYBP21-201ENST00000443300 1113 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 RPL7P19-201ENST00000469948 618 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC021205.2-201ENST00000480069 347 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 NDUFA5P2-201ENST00000519723 344 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 IGKV2D-10-201ENST00000520194 281 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC093014.1-201ENST00000548926 724 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC006960.3-201ENST00000561845 705 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 MIR4700-201ENST00000578311 74 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 CBX3P2-202ENST00000583365 535 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 SUMO2P14-201ENST00000604488 293 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AL096803.3-201ENST00000609032 532 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 MIR6867-201ENST00000610636 67 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AP006248.3-201ENST00000623580 594 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 AC112484.5-201ENST00000624189 228 ntBASIC3.28□□□□□ -1.88
HMG20AQ9NP66 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.28□□□□□ -1.88
HMG20AQ9NP66 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.89
HMG20AQ9NP66 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMG20AQ9NP66 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms