Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC011978.2-201ENST00000569835 2054 ntBASIC3.97□□□□□ -1.77
TM9SF3Q9HD45 AF127577.6-201ENST00000623352 2191 ntBASIC3.97□□□□□ -1.77
TM9SF3Q9HD45 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.97□□□□□ -1.77
TM9SF3Q9HD45 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TM9SF3Q9HD45 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.97□□□□□ -1.77
TM9SF3Q9HD45 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TM9SF3Q9HD45 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.77
TM9SF3Q9HD45 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 HSPE1P26-201ENST00000405341 275 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 SNORA11.1-201ENST00000408133 129 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 RNU2-21P-201ENST00000410368 188 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 VTA1P1-201ENST00000414044 866 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 OR4F13P-201ENST00000428478 931 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AL590399.6-201ENST00000446396 307 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 snoU13.7-201ENST00000459220 104 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AL035404.1-201ENST00000497982 568 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC109458.1-201ENST00000508858 316 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 RNU6-352P-201ENST00000516908 107 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 RNA5SP179-201ENST00000517284 121 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AGGF1P8-201ENST00000562979 1000 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 ZNF192P1-203ENST00000565888 810 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 MTATP6P25-201ENST00000574491 261 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC079610.2-201ENST00000604818 690 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC091167.4-201ENST00000605079 184 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC069200.1-201ENST00000609511 323 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 CR589904.2-201ENST00000612533 440 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.96□□□□□ -1.78
TM9SF3Q9HD45 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 RPL21P112-201ENST00000434403 463 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC069540.1-201ENST00000446320 988 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 SNRPGP3-201ENST00000469405 227 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC093853.1-201ENST00000515689 483 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC092851.1-201ENST00000535964 478 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC012414.2-201ENST00000559474 187 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC005242.1-201ENST00000585658 438 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC110741.2-201ENST00000605278 268 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AP005264.7-201ENST00000625003 745 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 SEPT7P7-201ENST00000420492 1301 ntBASIC3.95□□□□□ -1.78
TM9SF3Q9HD45 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 SNORA63.1-201ENST00000362493 131 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 Y_RNA.333-201ENST00000365274 102 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 RNU6-1293P-201ENST00000384077 107 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 MIR7-3-201ENST00000384898 110 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 HMGB3P19-201ENST00000403971 560 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 MIR1250-201ENST00000408098 113 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 RPS3AP25-201ENST00000411660 793 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC093578.1-201ENST00000415219 368 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC023128.2-201ENST00000420880 1223 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 AC017083.1-201ENST00000428093 483 ntBASIC3.94□□□□□ -1.78
TM9SF3Q9HD45 CYCSP43-201ENST00000438233 310 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms