Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 HMGN1P11-201ENST00000508668 303 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC105036.1-201ENST00000566222 271 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 GMCL1P2-201ENST00000605230 823 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC005972.3-201ENST00000606304 481 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AL391497.1-201ENST00000608671 547 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC110801.1-201ENST00000623590 212 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.36□□□□□ -1.87
LRTM1Q9HBL6 AC090337.1-201ENST00000579651 2074 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC110792.3-201ENST00000595906 1614 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 SNORA73.2-201ENST00000364946 201 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AP002088.1-201ENST00000382740 395 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 SNORD3H-201ENST00000384486 214 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 DBIP2-201ENST00000419076 262 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 HSFY1P1-201ENST00000423928 1178 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AP000907.1-201ENST00000428428 510 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC007967.1-201ENST00000455422 1159 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 RPL9P32-201ENST00000464118 620 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC012170.1-201ENST00000495139 359 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 OR8I1P-201ENST00000529291 931 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 AC103710.3-201ENST00000608157 948 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRTM1Q9HBL6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 RANP4-201ENST00000413361 655 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 CYCSP20-201ENST00000473154 315 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 TRAV31-201ENST00000502780 342 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 GMPSP1-201ENST00000514075 579 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 RNU6-347P-201ENST00000516658 105 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 CCNG2P1-201ENST00000549521 1000 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AC006116.10-201ENST00000591836 581 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AC012531.5-201ENST00000611375 151 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AC022960.2-201ENST00000616300 666 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRTM1Q9HBL6 MTND5P1-201ENST00000445440 1375 ntBASIC3.34□□□□□ -1.88
LRTM1Q9HBL6 USP8P1-201ENST00000494673 3183 ntBASIC3.34□□□□□ -1.88
LRTM1Q9HBL6 AC007342.7-201ENST00000624610 2337 ntBASIC3.33□□□□□ -1.88
LRTM1Q9HBL6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRTM1Q9HBL6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms