Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL512646.1-201ENST00000269395 1077 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 Y_RNA.311-201ENST00000365068 96 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 SNORD116-23-201ENST00000384645 92 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RNU6-1300P-201ENST00000391046 108 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 TAF9BP1-201ENST00000396646 746 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL121834.1-202ENST00000404494 277 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 TIMM9P2-201ENST00000419324 266 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL022400.1-201ENST00000423946 935 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RPL18P10-201ENST00000425606 538 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 VDAC1P6-201ENST00000430062 855 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL050321.1-201ENST00000432363 400 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC010153.1-201ENST00000432862 727 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 MTCO2P16-201ENST00000436962 677 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RPL36AP15-201ENST00000444514 266 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 TAF9P1-201ENST00000445421 515 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 H2AFZP5-201ENST00000446960 382 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 TAF9P2-201ENST00000454958 515 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RPS23P7-201ENST00000466210 444 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AK3P4-201ENST00000504283 583 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AP003033.1-201ENST00000527244 415 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC024909.2-201ENST00000553035 286 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC136624.4-201ENST00000573044 370 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC011260.1-201ENST00000578420 472 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC006539.2-201ENST00000601729 572 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL390838.2-201ENST00000602394 274 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 MIR6853-201ENST00000619642 74 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL607023.1-201ENST00000620045 248 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC124312.6-202ENST00000623624 418 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AF246928.1-201ENST00000623768 87 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC007494.3-201ENST00000624660 743 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 CDRT1-208ENST00000630868 794 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC017104.4-201ENST00000636283 1592 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC006971.1-201ENST00000407916 4486 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AL118496.1-201ENST00000440201 1812 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 AC068254.2-201ENST00000623938 3577 ntBASIC4.76□□□□□ -1.65
USP29Q9HBJ7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.76□□□□□ -1.65
USP29Q9HBJ7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC087359.1-201ENST00000508335 1740 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RNU5D-1-201ENST00000363299 116 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 SNORA51.12-201ENST00000384448 134 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RNA5SP332-201ENST00000391063 115 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 VDAC2P1-201ENST00000399358 958 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AL031577.2-201ENST00000404133 280 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RNU2-42P-201ENST00000410697 113 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 HSFY4P-201ENST00000415994 1181 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC140479.3-201ENST00000418944 1126 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RPS27AP7-201ENST00000422792 455 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 PPIAP17-201ENST00000438507 471 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RPL7P59-201ENST00000447700 943 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC009961.3-201ENST00000449832 765 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RN7SL817P-201ENST00000480777 288 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RPL36AP41-201ENST00000493820 306 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC011352.3-201ENST00000505162 593 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC111000.3-201ENST00000508057 576 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 MTND5P13-201ENST00000513046 1079 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.75□□□□□ -1.65
USP29Q9HBJ7 RNU6-885P-201ENST00000516607 104 ntBASIC4.75□□□□□ -1.65
USP29Q9HBJ7 HIGD1AP6-201ENST00000521833 279 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms